DRSC/TRiP Functional Genomics Resources

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Protein Alignment ich and CG4374

DIOPT Version :10

Sequence 1:NP_649848.2 Gene:ich / 41069 FlyBaseID:FBgn0286204 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_651146.2 Gene:CG4374 / 42767 FlyBaseID:FBgn0039078 Length:772 Species:Drosophila melanogaster


Alignment Length:673 Identity:144/673 - (21%)
Similarity:216/673 - (32%) Gaps:234/673 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 YMQSAYHPQNQSNPTSTTQSNGGSNSNSNNSNEHNIV--------------------SSSTCLPE 161
            :.|...|.||...|   ..|:.|.|:|:||:|.|..|                    :|:..:.:
  Fly    58 HQQQQQHHQNHQQP---PHSHNGHNNNNNNNNNHVQVVHQPITSQSQQQSLCGGTRTNSNNMIHD 119

  Fly   162 SVLSGSGGGGG-------------GNDACLADVKLFADSQLDSKLYS----------------VA 197
            ....|:|||||             |.|..|...:.:...:.:|:|.|                |.
  Fly   120 GGGGGAGGGGGVVVPVGNRNGTSNGGDPTLQGYEFWHQDKDNSRLDSSSIFEDLDRYCWQQQPVT 184

  Fly   198 DSCVMNGSGS----------------------------------------GSAANGNGSGPSIAT 222
            .|....||.|                                        .|:|..:|:|.|..|
  Fly   185 TSASNGGSASTNQPSPTSPQGHLQQQQQHQQHQQLQQQQQQQQQQQPNANSSSAASSGAGSSSDT 249

  Fly   223 LTPIDQV------------------------------ADSLHNSGVRIYKDLTEYVDMNSIDDIA 257
            ::.:|..                              .|||..|.....|....|.|.....|..
  Fly   250 ISSLDTTDGQIYTLTVLNGGEPWLKRSESEQLPTSLDLDSLLGSFPGYIKSEYPYDDSGFSTDGK 314

  Fly   258 AIIGS---AIADTTVPNQLDKDDNNDTRDSWMDLDAWIDGNCIQQESAKVLVSQQDSLGDF-ILP 318
            .:||:   .::..:.| |........|..|.:...:...||.:.|:.|:.    |::..|: :..
  Fly   315 DVIGNGTDGLSSISQP-QNQGQQAQQTLPSLVTAISLAGGNDLGQQLAQF----QNNNNDWHMAD 374

  Fly   319 HSPLPMHASSSTLQSLL-----SHGY-----------MPL------------------------- 342
            |:   .....||.:|||     ..||           ||:                         
  Fly   375 HN---TETEQSTAESLLRSALQGKGYAKGLHMQNGLTMPVVKDEDMRRLLFADEAAALGFADSTL 436

  Fly   343 -------------LQNRLQNGPPNGNSSGGGGGAN----------QGAGIKGDPQAPTSTSYCNE 384
                         |.::.|............|.||          :.|......:.....:...:
  Fly   437 SAAQMFDEAQGIHLSSQQQQQQQQQQQQAHNGNANILVDDMFLSLENAFSDDFEKIKRIANEVQQ 501

  Fly   385 LAAATSSSCSPPGSVVSTTDNPNGLMINPRYLSNPTNNQATGNLHQQGGYSMQASGLSLKDNGLC 449
            ..:|.||....||..|.::|..  :.|:|    :|....| |.|........:.|..:       
  Fly   502 FCSAGSSGTPTPGDYVPSSDVL--MQISP----SPAVTSA-GQLQPPQPLKPEVSTST------- 552

  Fly   450 SPDLLGNYPHTTTASTTGSEMRTGAPKAKRSRSQKKSNQQQQQQQQQQQQQGDGG---------- 504
            ||      .....||...:.:|:|....|..::.|:|:............|..||          
  Fly   553 SP------TSAVVASAASNHVRSGGGVVKPKKAYKRSSSNNNNPNVANNNQSSGGNPLIAGSGSG 611

  Fly   505 -----GQPTTPQMSAISPSGFSASDLSG-LLGKEKPVHRCSICNRGFLNKSNIKVHLRTHTGEKP 563
                 |..::...|..:.||.|:|..|| ...||:.:|.||||.:||.:|.::.||:||||||||
  Fly   612 SSSSSGSASSSSNSPPANSGGSSSSSSGSTQRKERSLHYCSICAKGFKDKYSVNVHIRTHTGEKP 676

  Fly   564 FRCDVCAKAFRQKAHLLKHQQIH 586
            |.|.:|.|:|||||||.||.|.|
  Fly   677 FACSLCGKSFRQKAHLAKHYQTH 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ichNP_649848.2 zf-C2H2 536..558 CDD:395048 11/21 (52%)
C2H2 Zn finger 538..558 CDD:275368 10/19 (53%)
zf-H2C2_2 550..575 CDD:463886 15/24 (63%)
C2H2 Zn finger 566..586 CDD:275368 13/19 (68%)
CG4374NP_651146.2 zf-C2H2_4 649..671 CDD:464025 11/21 (52%)
C2H2 Zn finger 651..671 CDD:275370 10/19 (53%)
zf-H2C2_2 667..688 CDD:463886 14/20 (70%)
C2H2 Zn finger 679..699 CDD:275370 13/19 (68%)

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