DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ich and hb

DIOPT Version :9

Sequence 1:NP_001262393.1 Gene:ich / 41069 FlyBaseID:FBgn0286204 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster


Alignment Length:781 Identity:142/781 - (18%)
Similarity:222/781 - (28%) Gaps:304/781 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SLLMSPCWGP-PQTSAQDQYLLDGHKLLLEHDLDSL------PSDADQKNSLDVLD-NL---LLN 69
            |:..||...| |.|:..:|:|....:.|.:..:|:|      ||..|| |||...| ||   ||.
  Fly    39 SVASSPRQSPIPSTNHLEQFLKQQQQQLQQQPMDTLCAMTPSPSQNDQ-NSLQHYDANLQQQLLQ 102

  Fly    70 GSSLNALSDLKPLPPFTGYTGHLSINGISGHHYHAIA---QRLPDESNNNYMQSAY----HPQNQ 127
            ...               |..|........||:|.:.   ..|......|.||..|    .|..|
  Fly   103 QQQ---------------YQQHFQAAQQQHHHHHHLMGGFNPLTPPGLPNPMQHFYGGNLRPSPQ 152

  Fly   128 SNPTSTTQ------SNGGSN-----------------SNSNNSN-----EHNIVSSSTCLPESVL 164
            ..|||.:.      :.|.|.                 :.|:.||     ||:.:|:|:       
  Fly   153 PTPTSASTIAPVAVATGSSEKLQALTPPMDVTPPKSPAKSSQSNIEPEKEHDQMSNSS------- 210

  Fly   165 SGSGGGGGGNDACLADVKLFADSQLDS-----KLYSVADSCVMNGSGSGSAANGNGSGPSIATLT 224
                          .|:|..|:|:.|.     .:|          :..|...|.......:..:|
  Fly   211 --------------EDMKYMAESEDDDTNIRMPIY----------NSHGKMKNYKCKTCGVVAIT 251

  Fly   225 PID---------------------QVADSLHNSGVRIYK---------DLTEYVDMNSI------ 253
            .:|                     .|.:..|:....|.|         |...|..:|..      
  Fly   252 KVDFWAHTRTHMKPDKILQCPKCPFVTEFKHHLEYHIRKHKNQKPFQCDKCSYTCVNKSMLNSHR 316

  Fly   254 DDIAAIIGSAIADTTVPNQ-------------------LDKDDNNDTRDSWMDLDAW-------- 291
            ...:::.....||.....:                   ||:|   .|.:..:.:|.:        
  Fly   317 KSHSSVYQYRCADCDYATKYCHSFKLHLRKYGHKPGMVLDED---GTPNPSLVIDVYGTRRGPKS 378

  Fly   292 IDGNCI----------QQESAKVLVSQQDSLGDFILPHSPLPMHASSSTLQSLLSHGYMPLLQNR 346
            .:|..|          :...|.|...||.|     .|..|:.....|:.||.      .||:|  
  Fly   379 KNGGPIASGGSGSGSRKSNVAAVAPQQQQS-----QPAQPVATSQLSAALQG------FPLVQ-- 430

  Fly   347 LQNGPPNGNSSGGGGG---------ANQGAGIKGDPQAPTSTSYCNELA---------------- 386
                   |||:.....         |...|.::..|..|:..:....||                
  Fly   431 -------GNSAPPAASPVLPLPASPAKSVASVEQTPSLPSPANLLPPLASLLQQNRNMAFFPYWN 488

  Fly   387 -----------AATSSSCSP--------------------------PGSVVSTTDNPNG------ 408
                       ||..:..||                          ..||.|..|...|      
  Fly   489 LNLQMLAAQQQAAVLAQLSPRMREQLQQQNQQQSDNEEEEQDDEYERKSVDSAMDLSQGTPVKED 553

  Fly   409 ---------LMINPRYLSNPTNNQATGNLHQQGGYSMQASG-LSLKDNGLCSPDLL--------- 454
                     |.:|.:.....|...::.|..::.|..::... |.|:...:.||:.|         
  Fly   554 EQQQQPQQPLAMNLKVEEEATPLMSSSNASRRKGRVLKLDTLLQLRSEAMTSPEQLKVPSTPMPT 618

  Fly   455 ------GNYP----HTTTASTTGSEMRTG-APKAKRSRSQKKS---NQQQQQQQQQQQQQGDGGG 505
                  |..|    |.:..|:....|.|. .|:|..|.|...|   |..............:...
  Fly   619 ASSPIAGRKPMPEEHCSGTSSADESMETAHVPQANTSASSTASSSGNSSNASSNSNGNSSSNSSS 683

  Fly   506 QPTTPQMSAISPSGFSASDLSGLLGKEKPVHRCSICNRGFLNKSNIKVHLRTHTGEKPFRCDVCA 570
            ..||..::| .|||..|:  :|      .::.|..|:..|.:.....:|:..|:.:..|:|::|.
  Fly   684 NGTTSAVAA-PPSGTPAA--AG------AIYECKYCDIFFKDAVLYTIHMGYHSCDDVFKCNMCG 739

  Fly   571 K 571
            :
  Fly   740 E 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ichNP_001262393.1 C2H2 Zn finger 538..558 CDD:275368 4/19 (21%)
zf-H2C2_2 550..575 CDD:316026 5/22 (23%)
C2H2 Zn finger 566..586 CDD:275368 2/6 (33%)
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368 2/19 (11%)
C2H2 Zn finger 271..291 CDD:275368 3/19 (16%)
zf-H2C2_2 283..308 CDD:290200 4/24 (17%)
C2H2 Zn finger 299..319 CDD:275368 3/19 (16%)
C2H2 Zn finger 327..345 CDD:275368 2/17 (12%)
C2H2 Zn finger 707..727 CDD:275371 4/19 (21%)
C2H2 Zn finger 735..757 CDD:275371 2/6 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24393
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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