DRSC/TRiP Functional Genomics Resources

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Protein Alignment ich and CG17328

DIOPT Version :9

Sequence 1:NP_001262393.1 Gene:ich / 41069 FlyBaseID:FBgn0286204 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster


Alignment Length:116 Identity:37/116 - (31%)
Similarity:58/116 - (50%) Gaps:19/116 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   478 KRSRSQKKSNQQQQQQQQQQQQQGDGGGQPTTPQMSAISPSGFSASDLSGLLGK-------EKPV 535
            :|||.|:|..::.:::           |....|:|.........:......|.:       ||| 
  Fly   122 RRSRYQRKPPEEHKKR-----------GPKPVPKMPHTCYECHKSFKCIAQLTQHIRTHTGEKP- 174

  Fly   536 HRCSICNRGFLNKSNIKVHLRTHTGEKPFRCDVCAKAFRQKAHLLKHQQIH 586
            ::||.|.:.|..|.|:|||.|||||:|||:|::|:|.|....:...||:||
  Fly   175 YQCSFCIQRFAQKYNLKVHERTHTGDKPFQCEICSKQFSALGNFQAHQKIH 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ichNP_001262393.1 C2H2 Zn finger 538..558 CDD:275368 10/19 (53%)
zf-H2C2_2 550..575 CDD:316026 16/24 (67%)
C2H2 Zn finger 566..586 CDD:275368 6/19 (32%)
CG17328NP_609786.2 zf-AD 8..80 CDD:214871
COG5048 146..>211 CDD:227381 23/65 (35%)
C2H2 Zn finger 149..169 CDD:275368 1/19 (5%)
C2H2 Zn finger 177..197 CDD:275368 10/19 (53%)
zf-H2C2_2 189..213 CDD:404364 15/23 (65%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
C2H2 Zn finger 233..253 CDD:275368
zf-H2C2_2 245..270 CDD:404364
C2H2 Zn finger 261..282 CDD:275368
C2H2 Zn finger 318..338 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24393
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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