DRSC/TRiP Functional Genomics Resources

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Protein Alignment ScsbetaA and AT2G20420

DIOPT Version :9

Sequence 1:NP_001163558.1 Gene:ScsbetaA / 41067 FlyBaseID:FBgn0037643 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_179632.1 Gene:AT2G20420 / 816561 AraportID:AT2G20420 Length:421 Species:Arabidopsis thaliana


Alignment Length:400 Identity:209/400 - (52%)
Similarity:280/400 - (70%) Gaps:10/400 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 QQLRNLNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKL--KTDNLVLKAQVLAGGRGKGT 95
            ||||.||:.|:....|:.:..:..|:...|.:.:|.......:  ....||:|:|:||||||.||
plant    22 QQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQDVFPNESELVVKSQILAGGRGLGT 86

  Fly    96 FKNGLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYFAVMMER 160
            ||:||||||.:|...: |||::.||:.|:|||||||..|::..||.:.|:.....|.||:::::|
plant    87 FKSGLKGGVHIVKRDE-AEEIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNEMYFSIILDR 150

  Fly   161 AFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKVGL---GGDGEDTHV 222
            ...||::||.|:||..||::|...||.|:..|||:..|:|.|.|.|:|.  ||   ..|.:|: :
plant   151 KSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVD--GLAPKAADRKDS-I 212

  Fly   223 QMLLNLYDLFVKKDALLVEINPYAEDAMSGCFFALDAKLRFDDNAEFRQKELFALRDWTQEDPKE 287
            :.:..||:||.|.|..::||||.||.: :....|.||||.|||||.|||||:||:||.|||||:|
plant   213 EQVKKLYELFRKTDCTMLEINPLAETS-TNQLVAADAKLNFDDNAAFRQKEVFAMRDPTQEDPRE 276

  Fly   288 VEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATAEAVKAAFKIITS 352
            |.|||.:||||.|||.||||||||||||||||||||:||.|||||||||.|:...|..||||:||
plant   277 VAAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEHQVVEAFKILTS 341

  Fly   353 DPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQGTKVKEARELIRTSGLKILARD 417
            |.||..||||||||||:|||||.||::|.|::.|.:||||||:||.|::.:.:::.||:|::..|
plant   342 DDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVVRLEGTNVEQGKRILKESGMKLITAD 406

  Fly   418 DLDKAADLAV 427
            |||.||:.||
plant   407 DLDDAAEKAV 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScsbetaANP_001163558.1 PLN00124 28..427 CDD:177736 207/398 (52%)
ATP-grasp_4 39..247 CDD:302634 84/212 (40%)
Ligase_CoA 307..427 CDD:278948 77/119 (65%)
AT2G20420NP_179632.1 PLN00124 1..421 CDD:177736 208/399 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 153 1.000 Domainoid score I1371
eggNOG 1 0.900 - - E1_COG0045
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2856
Inparanoid 1 1.050 392 1.000 Inparanoid score I494
OMA 1 1.010 - - QHG60702
OrthoDB 1 1.010 - - D973871at2759
OrthoFinder 1 1.000 - - FOG0001148
OrthoInspector 1 1.000 - - oto3204
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11815
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2690
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.940

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