DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ScsbetaA and aclyb

DIOPT Version :9

Sequence 1:NP_001163558.1 Gene:ScsbetaA / 41067 FlyBaseID:FBgn0037643 Length:503 Species:Drosophila melanogaster
Sequence 2:XP_001334195.4 Gene:aclyb / 794259 ZFINID:ZDB-GENE-090909-2 Length:1111 Species:Danio rerio


Alignment Length:396 Identity:97/396 - (24%)
Similarity:160/396 - (40%) Gaps:82/396 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LKTDNLVLKAQVLAGGRGKGTFKNGLKGGVRVVYDPQTAEE-LSSKMIDQLLVTKQTGAAGRICK 138
            |.|:.||:|...|...|||       .|.|.|....::.:| |.|.::.::.|    |.|..:.|
Zfish    50 LLTERLVVKPDQLIKRRGK-------LGLVAVDLKLESVQEWLKSHLMTEITV----GNAKGVLK 103

  Fly   139 KVMVAERKFP---RREFYFAVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLT 200
            |.:: |...|   ..|||..:...|  .|..::...||||:|.:|...:....|        |:.
Zfish   104 KFLI-EPFVPHIQEEEFYVCIYASR--EGSHVLFHHEGGVEIGDVDNKAQRLTL--------GID 157

  Fly   201 SEQAEKIVKK---VGLGGDGEDTHVQMLLNLYDLFVKKDALLVEINP--YAEDAMSGCFFALDAK 260
            .:..|:||.:   |.:..|.::.....::.|::|:.......:||||  ..:|.:    :.||..
Zfish   158 EKLMEEIVTQQLLVHVPDDKKEVLASFIVGLFNLYEDLYFTYLEINPLVVTKDGV----YVLDMA 218

  Fly   261 LRFDDNAEFRQKEL---------FALRDWTQE----DPKEVEAAKYNLNYIALDGTIGCMVNGAG 312
            .:.|..||:..|..         |....:.:|    |......|...|..:...|.|..||.|.|
Zfish   219 AKIDSAAEYICKPKWGDVEFPPPFGREAYPEEAYIADLDSKSGASLKLTVLNPSGRIWTMVAGGG 283

  Fly   313 LAMATMDIIKLYGG--EPANFLDVGGGATAEAV----KAAFKIIT----SDPKVLCILVNIFGGI 367
            .::...|.|...||  |.||:.:..|..:.:.:    |....::|    ||.|||     |.||.
Zfish   284 ASVVYSDTICDLGGVDELANYGEYSGSPSEQQMYDYAKTILLLMTREKHSDGKVL-----IIGGS 343

  Fly   368 MR--CDVIA--EGIISATKDL-----NLNMPVVVRLQGTKVKEARELIRTSGLKILARDDLDKAA 423
            :.  .:|.|  :||:.|.||.     ...:.:.||..|...:|        ||:::.  ::.|..
Zfish   344 IANFTNVAATFKGIVRAIKDYQEPLKEHEVTIFVRRGGPNYQE--------GLRVMG--EVGKTT 398

  Fly   424 DLAVHL 429
            .:.:|:
Zfish   399 GIPIHV 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScsbetaANP_001163558.1 PLN00124 28..427 CDD:177736 96/392 (24%)
ATP-grasp_4 39..247 CDD:302634 46/180 (26%)
Ligase_CoA 307..427 CDD:278948 36/138 (26%)
aclybXP_001334195.4 PLN02235 1..419 CDD:177879 97/396 (24%)
ATP-grasp_4 <55..207 CDD:302634 44/173 (25%)
Citrate_bind 247..421 CDD:292732 43/173 (25%)
PLN02522 501..1104 CDD:178137
NADB_Rossmann 505..610 CDD:304358
Ligase_CoA 670..795 CDD:304578
CCL_ACL-C 866..1103 CDD:99854
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.