DRSC/TRiP Functional Genomics Resources

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Protein Alignment ScsbetaA and suclg2

DIOPT Version :9

Sequence 1:NP_001163558.1 Gene:ScsbetaA / 41067 FlyBaseID:FBgn0037643 Length:503 Species:Drosophila melanogaster
Sequence 2:XP_012816430.1 Gene:suclg2 / 496495 XenbaseID:XB-GENE-956242 Length:431 Species:Xenopus tropicalis


Alignment Length:436 Identity:219/436 - (50%)
Similarity:280/436 - (64%) Gaps:11/436 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASFLARTGGPLIE-TVRPAAIKKILGLAPIAVQQLRNLNVQEHVSYSLLNEAKIPTPRFAVAKNG 65
            ||..||.|..|.. |.:.|.::...|   :.|...|.||:||:.|..|:.:..:...||.||.|.
 Frog     3 ASIAARAGNVLGSFTAKSALLRTAQG---VQVSSRRWLNLQEYQSKKLMADHGVTVQRFFVADNA 64

  Fly    66 KEANDIATKLKTDNLVLKAQVLAGGRGKGTFKNGLKGGVRVVYDPQTAEELSSKMIDQLLVTKQT 130
            .:|.|.|.:||...:|||||:||||||||||.:||||||.:..||...|||:.:||...|.||||
 Frog    65 NDALDAAKRLKAREIVLKAQILAGGRGKGTFDSGLKGGVHLTKDPNKVEELTKQMIGYNLTTKQT 129

  Fly   131 GAAGRICKKVMVAERKFPRREFYFAVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDI 195
            .|.|....||||||.....||.|.|::|:||.|||||:.|.:||:||||||..:|:.|..|.|||
 Frog   130 VAGGVKVHKVMVAEALDISRETYLAILMDRACNGPVLVGSPQGGMDIEEVAEKTPELIFKEEIDI 194

  Fly   196 GTGLTSEQAEKIVKKVGLGGDGEDTHVQMLLNLYDLFVKKDALLVEINPYAE--DAMSGCFFALD 258
            ..|:...||.::...:|..|..:....:.:..||.||:|.||..||:||:.|  :....||   |
 Frog   195 FEGIKDSQALRMADNLGFKGPLQQQAAEQIKRLYHLFLKVDATQVEVNPFGETPEGQVVCF---D 256

  Fly   259 AKLRFDDNAEFRQKELFALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKL 323
            ||:.|||||||||||:||:.|.::.||.|.||..|:|.||.:||.|.|.||||||||||.|||.|
 Frog   257 AKINFDDNAEFRQKEIFAMDDTSETDPIENEANSYDLKYIGMDGNIACFVNGAGLAMATCDIIDL 321

  Fly   324 YGGEPANFLDVGGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNM 388
            :||:||||||:|||.....|..|||::|:||||..|||||||||:.|.:||.||..|.::|.|.:
 Frog   322 HGGKPANFLDLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKV 386

  Fly   389 PVVVRLQGTKVKEARELIRTSGLKILARDDLDKAADLAVHLAQIVK 434
            |:||||:||.|.||:.::..|||.|.:.:|||.||..||  |.|.|
 Frog   387 PLVVRLEGTNVHEAKRILAESGLPITSANDLDDAARKAV--ASIAK 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScsbetaANP_001163558.1 PLN00124 28..427 CDD:177736 205/400 (51%)
ATP-grasp_4 39..247 CDD:302634 99/207 (48%)
Ligase_CoA 307..427 CDD:278948 70/119 (59%)
suclg2XP_012816430.1 sucC 38..430 CDD:234813 206/396 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60702
OrthoDB 1 1.010 - - D342254at33208
OrthoFinder 1 1.000 - - FOG0001148
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.930

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