DRSC/TRiP Functional Genomics Resources

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Protein Alignment ScsbetaA and ScsbetaG

DIOPT Version :9

Sequence 1:NP_001163558.1 Gene:ScsbetaA / 41067 FlyBaseID:FBgn0037643 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_001286941.1 Gene:ScsbetaG / 44001 FlyBaseID:FBgn0029118 Length:416 Species:Drosophila melanogaster


Alignment Length:418 Identity:206/418 - (49%)
Similarity:271/418 - (64%) Gaps:11/418 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LIETVRPAAIKKILGLAPIAVQQLRNLNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLK 76
            |::.|..|  :.|:...|:     ||||:.|..|..||.:..:...:|.|..|.|...::....:
  Fly     4 LLKAVTTA--RHIVHKVPV-----RNLNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFE 61

  Fly    77 TDNLVLKAQVLAGGRGKGTFKNGLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKKVM 141
            ....|:|||:||||||||||.||.||||.:..:......|:.:||...|:||||..:|.:..|||
  Fly    62 CPEYVVKAQILAGGRGKGTFDNGFKGGVHITTNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVM 126

  Fly   142 VAERKFPRREFYFAVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEK 206
            ||......||.|..::::|..||||||||..||:|||.||..:|:.|...|:|||..:......:
  Fly   127 VARSINITRETYLCILLDREHNGPVLIASPAGGMDIEAVAEETPEKIKTVPLDIGKPIPESTLLE 191

  Fly   207 IVKKVGLGGDGEDTHVQMLLNLYDLFVKKDALLVEINPYAEDAMSGCFFALDAKLRFDDNAEFRQ 271
            :.|.:...||......:.:..||.||...||:.:||||.|| ...|...::||||.|||||:|||
  Fly   192 VAKFLEFKGDSVKRCAEEIQKLYTLFKAVDAVQIEINPLAE-TDKGEVISVDAKLNFDDNAQFRQ 255

  Fly   272 KELFALRDWTQE--DPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDV 334
            |::|:: |.|:|  ||:|||||||||||:|:||.|||:||||||||||||||||.||||||||||
  Fly   256 KDIFSM-DVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLDV 319

  Fly   335 GGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQGTKV 399
            |||...:.|..||:|:|:||||..||||:||||:.|..||.||::|:|.|.||:|:||||:||.|
  Fly   320 GGGVREDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNVPLVVRLEGTNV 384

  Fly   400 KEARELIRTSGLKILARDDLDKAADLAV 427
            .:|||:::.|||.|....|||.||..||
  Fly   385 NQAREILKNSGLPIQTASDLDDAAHKAV 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScsbetaANP_001163558.1 PLN00124 28..427 CDD:177736 200/400 (50%)
ATP-grasp_4 39..247 CDD:302634 81/207 (39%)
Ligase_CoA 307..427 CDD:278948 76/119 (64%)
ScsbetaGNP_001286941.1 sucC 24..416 CDD:234813 198/391 (51%)
ATP-grasp_4 24..232 CDD:302634 81/207 (39%)
Ligase_CoA 292..412 CDD:278948 76/119 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444219
Domainoid 1 1.000 146 1.000 Domainoid score I203
eggNOG 1 0.900 - - E1_COG0045
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 314 1.000 Inparanoid score I75
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D27349at7147
OrthoFinder 1 1.000 - - FOG0001148
OrthoInspector 1 1.000 - - otm51426
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11815
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
98.900

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