DRSC/TRiP Functional Genomics Resources

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Protein Alignment ScsbetaA and sucla2

DIOPT Version :9

Sequence 1:NP_001163558.1 Gene:ScsbetaA / 41067 FlyBaseID:FBgn0037643 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_998191.1 Gene:sucla2 / 406299 ZFINID:ZDB-GENE-040426-1963 Length:466 Species:Danio rerio


Alignment Length:447 Identity:258/447 - (57%)
Similarity:333/447 - (74%) Gaps:16/447 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TVRPAAIKKILG------------LAP-IAVQQLRNLNVQEHVSYSLLNEAKIPTPRFAVAKNGK 66
            ||..||  |:||            .:| :::||.|.|::.|::|..||.||.|..|...||....
Zfish    22 TVSSAA--KVLGGTSGLFGHHGNQPSPMLSLQQQRKLSLHEYMSIGLLKEAGISVPAGMVASTPD 84

  Fly    67 EANDIATKLKTDNLVLKAQVLAGGRGKGTFKNGLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTG 131
            ||...|.::.:.:||:||||||||||||||:.|||||||:||.|:.|.::|||||.:.|.|||||
Zfish    85 EAYTAAKQIGSKDLVIKAQVLAGGRGKGTFEGGLKGGVRIVYSPEEARDISSKMIGKKLFTKQTG 149

  Fly   132 AAGRICKKVMVAERKFPRREFYFAVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIG 196
            .|||||.:|.|.||::||||:|||:.|||::.|||||.|.:|||:||:|||.:||||:.|||||.
Zfish   150 EAGRICNQVFVCERRYPRREYYFAITMERSYQGPVLIGSSQGGVNIEDVAAENPDAIVKEPIDIV 214

  Fly   197 TGLTSEQAEKIVKKVGLGGDGEDTHVQMLLNLYDLFVKKDALLVEINPYAEDAMSGCFFALDAKL 261
            .|:..:||.|:.:|:|......:...:.:|.|||:|:|.||.:|||||..||: ||....:|||:
Zfish   215 EGIKMDQAIKVAEKMGFPPALINEAAENMLKLYDVFIKYDASMVEINPMVEDS-SGIVMCMDAKI 278

  Fly   262 RFDDNAEFRQKELFALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGG 326
            .||.||.:|||::|.:|||:|||.::.:|||.:||||.|||||||:||||||||||||||||:||
Zfish   279 NFDSNAAYRQKKVFDMRDWSQEDARDRQAAKADLNYIGLDGTIGCLVNGAGLAMATMDIIKLHGG 343

  Fly   327 EPANFLDVGGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVV 391
            .|||||||||||||:.|..|||:||||.||..||||||||||||||||:|||.|..||:|.:|:|
Zfish   344 TPANFLDVGGGATAQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIIMAVTDLDLKIPIV 408

  Fly   392 VRLQGTKVKEARELIRTSGLKILARDDLDKAADLAVHLAQIVKLAREMKMDVNFEIP 448
            ||||||:|.:|:.||..|.|||||.||||:||.:.|.|::||.||:|.::||.|::|
Zfish   409 VRLQGTRVDDAKALIAASPLKILACDDLDEAAKMVVKLSEIVSLAKEAQVDVKFQLP 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScsbetaANP_001163558.1 PLN00124 28..427 CDD:177736 240/399 (60%)
ATP-grasp_4 39..247 CDD:302634 112/207 (54%)
Ligase_CoA 307..427 CDD:278948 88/119 (74%)
sucla2NP_998191.1 sucC 58..448 CDD:234813 237/390 (61%)
ATP-grasp_2 58..265 CDD:285620 112/206 (54%)
Ligase_CoA 324..444 CDD:278948 88/119 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576708
Domainoid 1 1.000 222 1.000 Domainoid score I2529
eggNOG 1 0.900 - - E1_COG0045
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2856
Inparanoid 1 1.050 493 1.000 Inparanoid score I1363
OMA 1 1.010 - - QHG60702
OrthoDB 1 1.010 - - D342254at33208
OrthoFinder 1 1.000 - - FOG0001148
OrthoInspector 1 1.000 - - oto39302
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11815
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1412
SonicParanoid 1 1.000 - - X2690
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.900

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