DRSC/TRiP Functional Genomics Resources

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Protein Alignment ScsbetaA and sucla2

DIOPT Version :9

Sequence 1:NP_001163558.1 Gene:ScsbetaA / 41067 FlyBaseID:FBgn0037643 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_989233.1 Gene:sucla2 / 394842 XenbaseID:XB-GENE-952586 Length:460 Species:Xenopus tropicalis


Alignment Length:425 Identity:251/425 - (59%)
Similarity:324/425 - (76%) Gaps:1/425 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 ILGLAPIAVQQLRNLNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLA 88
            :.|...:..||.|||::.|::|..||..|.:..|:..|||...||..:|.::.:.:||:||||||
 Frog    36 VFGCHGVQAQQHRNLSLHEYLSMDLLKSAGVAIPKGCVAKTPDEAFTVAKEIGSKDLVVKAQVLA 100

  Fly    89 GGRGKGTFKNGLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFY 153
            ||||||||:.||||||::||.|:.|::::|:||.:.|.|||||..||||..|.:.||::||||:|
 Frog   101 GGRGKGTFEGGLKGGVKIVYSPEEAKDIASQMIGKKLFTKQTGEKGRICNHVFICERRYPRREYY 165

  Fly   154 FAVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKVGLGGDGE 218
            ||:.|||||.|||||.|..|||:||:|||.:||||:.|||||..|:..|||.::.:|:|...:..
 Frog   166 FAIAMERAFQGPVLIGSSHGGVNIEDVAAENPDAIVKEPIDIVEGIKKEQAVRLAEKMGFPSNIV 230

  Fly   219 DTHVQMLLNLYDLFVKKDALLVEINPYAEDAMSGCFFALDAKLRFDDNAEFRQKELFALRDWTQE 283
            |.....::|||:||:|.||.:|||||..||| ||....:|||:.||.||.:||||:|.||||:||
 Frog   231 DEAANCMINLYNLFMKYDATMVEINPMVEDA-SGVVMCMDAKINFDSNAAYRQKEVFELRDWSQE 294

  Fly   284 DPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATAEAVKAAFK 348
            |.::.:|||.:||||.|||.|||:||||||||||||||||:||.||||||||||||...|..||:
 Frog   295 DERDRQAAKSDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTEAFR 359

  Fly   349 IITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQGTKVKEARELIRTSGLKI 413
            :||||.|||.||||||||||||||||:|||.|.|||.|.:|:|||||||:|.:|:.||..|||||
 Frog   360 LITSDKKVLAILVNIFGGIMRCDVIAQGIIMAVKDLELRIPIVVRLQGTRVDDAKALITASGLKI 424

  Fly   414 LARDDLDKAADLAVHLAQIVKLAREMKMDVNFEIP 448
            ||.||||:||.:.|.|::||.||::.::||.|::|
 Frog   425 LACDDLDEAAKMVVKLSEIVTLAKQAQVDVKFQLP 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScsbetaANP_001163558.1 PLN00124 28..427 CDD:177736 240/398 (60%)
ATP-grasp_4 39..247 CDD:302634 109/207 (53%)
Ligase_CoA 307..427 CDD:278948 89/119 (75%)
sucla2NP_989233.1 sucC 52..442 CDD:234813 237/390 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 223 1.000 Domainoid score I2521
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H2856
Inparanoid 1 1.050 501 1.000 Inparanoid score I1328
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D342254at33208
OrthoFinder 1 1.000 - - FOG0001148
OrthoInspector 1 1.000 - - oto104024
Panther 1 1.100 - - LDO PTHR11815
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2690
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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