DRSC/TRiP Functional Genomics Resources

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Protein Alignment ScsbetaA and suclg2

DIOPT Version :10

Sequence 1:NP_001163558.1 Gene:ScsbetaA / 41067 FlyBaseID:FBgn0037643 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_001373238.1 Gene:suclg2 / 317746 ZFINID:ZDB-GENE-030114-3 Length:432 Species:Danio rerio


Alignment Length:427 Identity:215/427 - (50%)
Similarity:278/427 - (65%) Gaps:17/427 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VRPAAIKKILGLAPIAVQQL------RNLNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATK 74
            :|.|:.|::|    :...||      |.||:||:.|..|:.::.:...||.||....||.:.|.:
Zfish    14 LRSASTKQLL----VCRNQLTRVSPRRWLNLQEYQSKKLMQDSGVAVQRFFVADTASEALEAAKR 74

  Fly    75 LKTDNLVLKAQVLAGGRGKGTFKNGLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKK 139
            ||...:|||||:||||||||.|.:||||||.:..||....||:|||:...|.||||...|...|.
Zfish    75 LKAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPAVVGELASKMLGYNLTTKQTPKEGVEVKT 139

  Fly   140 VMVAERKFPRREFYFAVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQA 204
            |||||.....||.|||::|:|:.||||::.|.:||:|||||||::|:.|..|.|||..|:..:||
Zfish   140 VMVAEALDISRETYFAILMDRSCNGPVMVGSPQGGMDIEEVAAATPELIFKEVIDIFEGVRDDQA 204

  Fly   205 EKIVKKVGLGGDGEDTHVQMLLNLYDLFVKKDALLVEINPYAE--DAMSGCFFALDAKLRFDDNA 267
            .::...:|..|..|......:..|||||:|.||..||:||..|  :....||   |||:.|||||
Zfish   205 LRMAANLGFKGPLERQAADQIKRLYDLFLKVDATQVEVNPLGETPEGQVVCF---DAKINFDDNA 266

  Fly   268 EFRQKELFALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFL 332
            |||||.:|::.|..:.||.|.|||||:|.||.:||.|.|.||||||||||.|||.|:||:|||||
Zfish   267 EFRQKAVFSMDDTAESDPIETEAAKYDLKYIGMDGNIACFVNGAGLAMATCDIIDLHGGKPANFL 331

  Fly   333 DVGGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQGT 397
            |:|||.....|.||||::|:||||..|||||||||:.|.:||.||..|.::|.|.:|:||||:||
Zfish   332 DLGGGVKENQVYAAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGT 396

  Fly   398 KVKEARELIRTSGLKILARDDLDKAADLAVHLAQIVK 434
            .|.||:.::..|||.|.:..|||.||..||  |.|.|
Zfish   397 NVHEAKRILSESGLPITSATDLDDAARKAV--AAIAK 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScsbetaANP_001163558.1 SucC 39..431 CDD:439815 204/393 (52%)
suclg2NP_001373238.1 SucC 39..420 CDD:439815 199/383 (52%)

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