DRSC/TRiP Functional Genomics Resources

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Protein Alignment ScsbetaA and SPCC1620.08

DIOPT Version :9

Sequence 1:NP_001163558.1 Gene:ScsbetaA / 41067 FlyBaseID:FBgn0037643 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_588466.1 Gene:SPCC1620.08 / 2539168 PomBaseID:SPCC1620.08 Length:433 Species:Schizosaccharomyces pombe


Alignment Length:432 Identity:227/432 - (52%)
Similarity:298/432 - (68%) Gaps:8/432 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KKILGLAPIAVQ---QLRNLNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLK 83
            :.:|..||.|..   |.|||.:.|::|:.:|.:..:..||.|.|::|:||..:|..||..:||:|
pombe     4 RSVLRKAPRAFSPFLQKRNLALHEYISHDILRKFGVDVPRGAPARSGEEAEKVARDLKVTDLVVK 68

  Fly    84 AQVLAGGRGKGTFKNGLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKKVMVAERKFP 148
            |||||||||||.|.:||:||||.|||...|...:.:||...|:|:|||.||:||..|.|.||||.
pombe    69 AQVLAGGRGKGQFDSGLRGGVRPVYDATEARMFAEQMIGHKLITRQTGPAGKICNVVYVCERKFI 133

  Fly   149 RREFYFAVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKVGL 213
            |:|:|||::|:|....|:::||.:||||||.|||.:|.||:...:.....|....||::|.|:|.
pombe   134 RKEYYFAILMDRENQCPMIVASDQGGVDIETVAAENPSAIIKRSLPNSPNLDPHIAEELVDKLGF 198

  Fly   214 GGDGEDTHVQMLLNLYDLFVKKDALLVEINPYAE--DAMSGCFFALDAKLRFDDNAEFRQKELFA 276
            ....:...|..::.||.:|...||..|||||.||  |....|   :||||.||||||||...:|.
pombe   199 SSSSKPKAVDAIVKLYKVFNDCDATQVEINPLAETTDHKVLC---MDAKLNFDDNAEFRHSNIFV 260

  Fly   277 LRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATAE 341
            |||.:||||.|..|||..||:|.|||.|||:||||||||||||||||:||||||||||||.|.||
pombe   261 LRDISQEDPDEARAAKVGLNFIKLDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGNANAE 325

  Fly   342 AVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQGTKVKEARELI 406
            |::.||.:||:|||...|.|||||||:||||||:|:||....||||:|::.|||||....|:|:|
pombe   326 AIREAFSLITNDPKTTAIFVNIFGGIVRCDVIAKGLISVVSALNLNIPIICRLQGTNQGAAKEVI 390

  Fly   407 RTSGLKILARDDLDKAADLAVHLAQIVKLAREMKMDVNFEIP 448
            ..|||:|.:.||||:||..|...:::|::|||..::|:||:|
pombe   391 NNSGLRIFSFDDLDEAAKKACRFSRVVEMAREADVNVSFELP 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScsbetaANP_001163558.1 PLN00124 28..427 CDD:177736 217/403 (54%)
ATP-grasp_4 39..247 CDD:302634 94/207 (45%)
Ligase_CoA 307..427 CDD:278948 79/119 (66%)
SPCC1620.08NP_588466.1 SucC 25..423 CDD:223123 214/400 (54%)
ATP-grasp_2 25..232 CDD:285620 94/206 (46%)
Ligase_CoA 291..410 CDD:278948 79/118 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 185 1.000 Domainoid score I774
eggNOG 1 0.900 - - E1_COG0045
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2856
Inparanoid 1 1.050 433 1.000 Inparanoid score I321
OMA 1 1.010 - - QHG60702
OrthoFinder 1 1.000 - - FOG0001148
OrthoInspector 1 1.000 - - oto101384
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11815
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1412
SonicParanoid 1 1.000 - - X2690
TreeFam 1 0.960 - -
1312.960

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