DRSC/TRiP Functional Genomics Resources

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Protein Alignment ScsbetaA and Suclg2

DIOPT Version :9

Sequence 1:NP_001163558.1 Gene:ScsbetaA / 41067 FlyBaseID:FBgn0037643 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_035637.2 Gene:Suclg2 / 20917 MGIID:1306824 Length:433 Species:Mus musculus


Alignment Length:440 Identity:217/440 - (49%)
Similarity:288/440 - (65%) Gaps:14/440 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAS--FLARTGGPLIETVRPAAIKKILGLAPIA--VQQLRNLNVQEHVSYSLLNEAKIPTPRFAV 61
            |||  .:|...|.|:   |..|::.:|.:...|  :...|.||:||:.|..|::|..:...||.|
Mouse     1 MASPVAIAAQAGKLL---RERALRPLLAVRSQAGHLTPRRWLNLQEYQSKKLMSEHGVRVQRFFV 62

  Fly    62 AKNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFKNGLKGGVRVVYDPQTAEELSSKMIDQLLV 126
            |...|||.:.|.:|....:|||||:||||||||.|.:||||||.:..||:...||:.:||...|.
Mouse    63 ANTAKEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGELAQQMIGYNLA 127

  Fly   127 TKQTGAAGRICKKVMVAERKFPRREFYFAVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYE 191
            ||||...|....||||||.....||.|.|::|:|:.||||::.|.:|||||||||||||:.|..|
Mouse   128 TKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDIEEVAASSPELIFKE 192

  Fly   192 PIDIGTGLTSEQAEKIVKKVGLGGDGEDTHVQMLLNLYDLFVKKDALLVEINPYAE--DAMSGCF 254
            .|||..|:...||:::.:.:|..|..::.....:..||.||:|.||..||:||:.|  :....||
Mouse   193 QIDIFEGIKDSQAQRMAENLGFLGSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCF 257

  Fly   255 FALDAKLRFDDNAEFRQKELFALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMD 319
               |||:.||||||||||::||:.|.::.:|.|.|||:|:|.||.|||.|.|.||||||||||.|
Mouse   258 ---DAKINFDDNAEFRQKDIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCD 319

  Fly   320 IIKLYGGEPANFLDVGGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDL 384
            ||.|.||:||||||:|||.....|..|||::||||||..|||||||||:.|.:||.||..|.::|
Mouse   320 IIFLNGGKPANFLDLGGGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACREL 384

  Fly   385 NLNMPVVVRLQGTKVKEARELIRTSGLKILARDDLDKAADLAVHLAQIVK 434
            .|.:|:||||:||.|:||:.::::|||.|.:..||:.||..||  |.:.|
Mouse   385 ELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLEDAAKKAV--ASVAK 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScsbetaANP_001163558.1 PLN00124 28..427 CDD:177736 204/402 (51%)
ATP-grasp_4 39..247 CDD:302634 98/207 (47%)
Ligase_CoA 307..427 CDD:278948 70/119 (59%)
Suclg2NP_035637.2 sucC 40..421 CDD:234813 199/383 (52%)
ATP-grasp_2 40..248 CDD:285620 98/207 (47%)
Ligase_CoA 307..421 CDD:278948 68/113 (60%)
Substrate binding, shared with subunit alpha. /evidence=ECO:0000255|HAMAP-Rule:MF_03221 366..368 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60702
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001148
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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