DRSC/TRiP Functional Genomics Resources

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Protein Alignment ScsbetaA and sucg-1

DIOPT Version :9

Sequence 1:NP_001163558.1 Gene:ScsbetaA / 41067 FlyBaseID:FBgn0037643 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_501266.1 Gene:sucg-1 / 177555 WormBaseID:WBGene00016844 Length:415 Species:Caenorhabditis elegans


Alignment Length:396 Identity:202/396 - (51%)
Similarity:263/396 - (66%) Gaps:3/396 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QLRNLNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFKN 98
            |.|.||:||..|..:|.:.......|.||.|.|||.:..........|:|||:||||||||.|.|
 Worm    16 QRRFLNLQEFQSKEILEKHGCSVQNFVVASNRKEAEEKWMSFGDHEYVVKAQILAGGRGKGKFIN 80

  Fly    99 GLK--GGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYFAVMMERA 161
            |.|  |||.:..:...|.|...:||.:.||||||.:.|....|||:||....:||.|.||:|:|.
 Worm    81 GTKGIGGVFITKEKDAALEAIDEMIGKRLVTKQTTSEGVRVDKVMIAEGVDIKRETYLAVLMDRE 145

  Fly   162 FNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKVGLGGDGEDTHVQMLL 226
            .||||::||.:||:|||.||..:|:.|...||||..|:|..|:.||.|.:...|.......|.:.
 Worm   146 SNGPVVVASPDGGMDIEAVAEKTPERIFKTPIDIQMGMTEGQSLKIAKDLQFEGKLIGVAAQEIK 210

  Fly   227 NLYDLFVKKDALLVEINPYAEDAMSGCFFALDAKLRFDDNAEFRQKELFALRDWTQEDPKEVEAA 291
            .|||||:..||..|||||..|.| .|..|.:|||:.|||:|.:||||:||...:.:.||:||:|.
 Worm   211 RLYDLFIAVDATQVEINPLVETA-DGRVFCVDAKMNFDDSAAYRQKEIFAYETFEEHDPREVDAH 274

  Fly   292 KYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATAEAVKAAFKIITSDPKV 356
            ::|||||.:||.|.|:||||||||||||:|||:||||||||||||..|.:||..|.:||||||:|
 Worm   275 QFNLNYIGMDGNIACLVNGAGLAMATMDLIKLHGGEPANFLDVGGAVTEDAVFNAVRIITSDPRV 339

  Fly   357 LCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQGTKVKEARELIRTSGLKILARDDLDK 421
            .|:|:||||||:.|..||.|::||...:.||:|:||||:||.|..|:::::.||||||..::||:
 Worm   340 KCVLINIFGGIVNCATIANGVVSAVNKIGLNVPMVVRLEGTNVDAAKQIMKKSGLKILTANNLDE 404

  Fly   422 AADLAV 427
            ||..||
 Worm   405 AAAKAV 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScsbetaANP_001163558.1 PLN00124 28..427 CDD:177736 200/394 (51%)
ATP-grasp_4 39..247 CDD:302634 93/209 (44%)
Ligase_CoA 307..427 CDD:278948 73/119 (61%)
sucg-1NP_501266.1 sucC 21..410 CDD:234813 197/389 (51%)
ATP-grasp_2 21..231 CDD:285620 93/209 (44%)
Ligase_CoA 290..410 CDD:278948 73/119 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60702
OrthoDB 1 1.010 - - D342254at33208
OrthoFinder 1 1.000 - - FOG0001148
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.830

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