DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pyd and dlg5

DIOPT Version :9

Sequence 1:NP_001246998.1 Gene:pyd / 41062 FlyBaseID:FBgn0262614 Length:2395 Species:Drosophila melanogaster
Sequence 2:XP_004916076.1 Gene:dlg5 / 779611 XenbaseID:XB-GENE-978275 Length:1971 Species:Xenopus tropicalis


Alignment Length:1471 Identity:280/1471 - (19%)
Similarity:464/1471 - (31%) Gaps:599/1471 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 HIAGEYLASEQQQQQQQQQQQHQQVQEQQQLGRRKAAAAAEINLANQVY--------WLGKQKTR 162
            |:..||..:.|.|.......:... :|.:.|.::..|.:.|:..|.|..        |..:::.:
 Frog   546 HLLREYYQARQIQDSATLDMERAN-KEIEVLRKQYEAMSHELKEATQEAEVAKCRRDWAFQERDK 609

  Fly   163 SRSRSNSVGNRSITSCMGGGGGGGEKERERGGDRDRPYIRNVDDLLQALGKRDGGDNNSNL--LE 225
            ..:...|:  |::...:       .:||:|........:||:||:     ::...|.:..|  |:
 Frog   610 IVAERESI--RTLCDNL-------RRERDRAVSELAEALRNLDDM-----RKQKNDASRELKELK 660

  Fly   226 TASTHSSSQRRRFKK------------GDRTTWEYHTVAVTR------VPGYGFGIAVSGGRDNP 272
            ....:...:..||::            .|...||...|...|      :...||.:|  .|.:.|
 Frog   661 EKMDNQMEKEARFRQLMAHSSHDSAIDTDSLEWETEVVEFERDREDMDLKALGFDVA--DGVNEP 723

  Fly   273 HFANGDPSIAVSDVLKGGPAEDRLQVNDRIISVNGVSLENVEYATAVQVLRDSGNTVQLVVKRR- 336
            .|. |:..|.|:.|.||..|:.||:|||.::.:|.|.|.|.:....::.:...|..:.:|::|| 
 Frog   724 LFP-GESCIFVTKVDKGSIADGRLRVNDCLLKINDVDLANKDRKQLLKAVLSGGEVINMVIRRRK 787

  Fly   337 ---------------------------------VPLNPINAAG---------------------- 346
                                             ||.:|....|                      
 Frog   788 SLGNRIITPLHIHLGSQKDSGISLESGVLVSAVVPGSPAAKEGSLVAGDRVVTINGISLDNKSVM 852

  Fly   347 ----------------------------------------------------------------- 346
                                                                             
 Frog   853 ECEALLRNCQESLNLSLLKVVPPNTSWSGQNLFENLKESCHVLSPNIHAQNKRNLKNNSSTQTDI 917

  Fly   347 --------------------AVQ---HQHS-HSLSSVG---LMANG-----SGGVAPTPITSLSQ 379
                                |:|   |.|| |||||:|   .|..|     .||      ..|..
 Frog   918 FNPDILECKKNMGDRTGSERALQLSCHSHSEHSLSSLGGEVFMGQGYDILDDGG------HPLGF 976

  Fly   380 PNSLNSSLVQNA----SSGQPIKVTLTKGGKKDDYGV---------------------------- 412
            .:::..:||:.|    |||...||.::.|..:.::.|                            
 Frog   977 ADTMEDNLVETATGKRSSGTWPKVMVSPGHSQGEFTVFKKPRHRKSIFDPDTFKRPQTPPKISFL 1041

  Fly   413 ----VLG-----------------------CRLFVKEISSKAREQL------------------- 431
                |||                       .:...:..||.|.:..                   
 Frog  1042 PPVQVLGHSPQPSKTERPPTPPTPPKRSDSIKFKHRHQSSSASDSTVTAGSPPTSPSPGPLPAET 1106

  Fly   432 -------NANGYSLQEGDIITRIHNTNC---GDTMSLKEAKKIIDGCKERLNLVVLRDITNQTAV 486
                   .|.|...:|..|...:  |.|   ||          ::||.:|.....|:....::|.
 Frog  1107 SHKAHHSRAIGSCCREDGIDCPL--TGCIGTGD----------VEGCLQRAEEPELKRARPRSAP 1159

  Fly   487 ----------------------SQLNLNNSASHQ----------ASGNIYAT--HQPQVSG---- 513
                                  |:..|:...:|.          ...:|:|.  :.|.:||    
 Frog  1160 ALRHRLAPVLIPHYALQKFSMNSEERLSPELAHDWIRFSPTRSPRHSDIFAASMYGPGMSGTVPR 1224

  Fly   514 ----CSSSNNNLEDPY-------LPGGASYSSQNLYVQPPTRTS---NG------PNINGNGLND 558
                |.:....|.:|.       :|.....||.|...|....:|   :|      .|.:.|...|
 Frog  1225 SLAPCPAVTAVLRNPIYTAWSHRVPSNNCPSSANQICQQHLHSSAQHHGRLSLDLSNKHPNEFCD 1289

  Fly   559 EKSNLTPRGRSRGPIMDGVSLQQLDR---PVTPTRGRSA----------------AIDEPPRPPP 604
            ...:..|.|.:..|....:...:.:|   |.||...||:                ::..||..|.
 Frog  1290 TSRSRVPHGSNSLPSSARLGSSRTERIKIPSTPRYPRSSVGSDRGSLSHSECSSPSLASPPHSPL 1354

  Fly   605 PRGSSGGAAQEDFYS---------SRRQLYEERQS----AEPRFISFQKEGS--VGIRLTGGNEA 654
            ...:|..|:.:...|         |...:.|.|:.    .|||.:..|| ||  :||.:.||...
 Frog  1355 NLETSSFASSQSQSSVASLPRISVSTVPIGERRKDRPLVEEPRHVKVQK-GSEPLGISIGGGESG 1418

  Fly   655 GIFVTAVQPGSPASLQGLMPGDKILKVNDMDMNGVTREEAVLFLLSLQDRIDLIVQY----CK-- 713
            ||||:.|..||.|...||..||::|:.|.:::...|.::|.|.:....|.|.::.||    |:  
 Frog  1419 GIFVSKVTTGSIAQQAGLEYGDQLLEFNGINLRNATEQQARLIIGQQCDTITILAQYNPNMCQHI 1483

  Fly   714 ----------------------------------EEYDE-------------------------- 718
                                              .|.||                          
 Frog  1484 HSRSSSRLDTSTTHSTPHSSGAATPDNHSIIDTVSEQDEGTMTPPSKESTPSTSPCSSLRTNAEG 1548

  Fly   719 --------VVTNQR--------------------------------------------------- 724
                    |||..:                                                   
 Frog  1549 IKRHSELRVVTLSKSPEKLGIQICGGNLHGIFVLDIEEENVVGGLLKGDMVLEYGSVDMRNRTAE 1613

  Fly   725 -------------------------------GDSFHIKTHFHCDNPSKGEMAFKAGDVFRVIDTL 758
                                           ||.|:|:..:........|::||..|:..|.|||
 Frog  1614 EAYLEMLKPAENIKVKVQQKIDEFNKLKDLPGDGFYIRALYDRQAELPSELSFKKDDILYVDDTL 1678

  Fly   759 HNGVVGSWQVLKIGRGHQEMQRGVIPNKSRAEELATAQFNATK--------KEMNANESRGNFFR 815
            ..|..|:|...::....|::|||.:|:|...|:..:.:.:.::        |.::| .:|.:|| 
 Frog  1679 PQGTFGTWMAWQLDENAQKLQRGQVPSKYMMEQEFSRRLSMSEGRDETMASKTLSA-AARRSFF- 1741

  Fly   816 RRRSTHRRSKSLSRENWD----DVVFSDSI-----SKFPAYERVVLRHPGFVRPVVLFGPVSDLA 871
            ||::.|:||.  ||:..|    |.:.:|||     |...||:||........|||::.||:.|..
 Frog  1742 RRKNKHKRSG--SRDGKDLQGLDTISTDSIPFLDESVSLAYQRVQRVDCTSPRPVLILGPLVDAV 1804

  Fly   872 RERLAKDFPDKF-STPLQDDDKSAAT----------------SGKCRIVRLSNIRDVMDRGKHAL 919
            ::.|.|:.|.|| ..||:....|...                ||...:..:::|:::.::..|.|
 Frog  1805 KDMLVKESPGKFCRCPLEVMKASQQAIERGVKDCLFIDYKRRSGHFDVTTVASIKEITEKDCHCL 1869

  Fly   920 LDITPNAVDRLNYAQFYPVVIFLKTDSKHVIKQLRHGL---PKAAHKSSKKLLEQCQKLERVWSH 981
            |||.|:|::||:....||:|:|::..|...||:.:..:   .|...|.||:..|...|:|:.:|.
 Frog  1870 LDIAPHAIERLHSVHIYPIVLFIRYKSTKQIKEQKDPIFLRDKVTQKHSKEQFETAHKIEQEYSK 1934

  Fly   982 IFSTQIALSDEESWYRKLRDSIDLQQSGAVWMSESKPVESL 1022
            .|:..|......|...::...:|.:||.|:|:    |..||
 Frog  1935 YFTAVIQGGALFSICNQICSIVDQEQSKALWI----PAGSL 1971

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pydNP_001246998.1 PDZ_signaling 249..334 CDD:238492 26/90 (29%)
PDZ_signaling 396..477 CDD:238492 21/164 (13%)
PDZ_signaling 633..710 CDD:238492 29/78 (37%)
SH3_ZO 729..790 CDD:212793 18/60 (30%)
GuKc 831..1007 CDD:214504 55/204 (27%)
ZU5 2263..2351 CDD:279170
dlg5XP_004916076.1 CARD 9..88 CDD:260018
Takusan 127..213 CDD:368141
Smc <136..544 CDD:224117
COG4372 443..>672 CDD:226809 24/140 (17%)
PDZ_signaling 697..784 CDD:238492 26/89 (29%)
PDZ_signaling 798..867 CDD:238492 4/68 (6%)
PDZ 1395..1477 CDD:214570 32/82 (39%)
dbPDZ_assoc 1475..1554 CDD:374667 5/78 (6%)
PDZ 1554..1633 CDD:214570 3/78 (4%)
SH3_DLG5 1649..1711 CDD:212794 18/61 (30%)
GuKc 1784..1960 CDD:214504 45/175 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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