DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pyd and tjp2

DIOPT Version :9

Sequence 1:NP_001246998.1 Gene:pyd / 41062 FlyBaseID:FBgn0262614 Length:2395 Species:Drosophila melanogaster
Sequence 2:XP_002935643.2 Gene:tjp2 / 733995 XenbaseID:XB-GENE-480467 Length:1209 Species:Xenopus tropicalis


Alignment Length:1350 Identity:371/1350 - (27%)
Similarity:566/1350 - (41%) Gaps:377/1350 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 NSNLLETASTHSSSQRRRFKKGDRTTWEYHTVAVTRVPGYGFGIAVSGGRDNPHFANGDPSIAVS 284
            |.||  :|...:||.       :...||..||.:.:....|||||||||:|||||.||:|||.:|
 Frog    25 NKNL--SAWLGASSM-------EELIWEQFTVTLQKDSKKGFGIAVSGGKDNPHFENGEPSIVIS 80

  Fly   285 DVLKGGPAEDRLQVNDRIISVNGVSLENVEYATAVQVLRDSGNTVQLVVK---------RRVP-- 338
            |||.||||:..||||||::.|||..::||.:|.|||.||..|.|..:|||         ||.|  
 Frog    81 DVLPGGPADGFLQVNDRVVMVNGTLMDNVFHAFAVQQLRKCGKTAVIVVKRPRKVQVTARRSPSP 145

  Fly   339 -LNP-----INAAGAVQHQHSHSLSSVGLMANGSG------------------------------ 367
             |:|     ::..|..:|:.::|..|.....:|:|                              
 Frog   146 ELDPRDIDAVDDDGPFEHRSAYSGYSERSWHSGNGHHSRESSPDRGYSKDQERGRSYDRDQDWVR 210

  Fly   368 ----------------------------------------------------------------G 368
                                                                            .
 Frog   211 GRSRERDLDDEREYRRERSRGRSLDRDQSEERRYKRDHKKSVDREESFERSYSGDYSPDRGNGRR 275

  Fly   369 VAP-------TPI--------TSLSQPNSLNSSLVQNASSGQPIKVTLTKGGKKDDYGVVLGCRL 418
            :||       .|:        :....|.....|...:....:||.|.|:|....::||:.||.::
 Frog   276 LAPDYRSEREMPVNRARDRLQSHSPSPEPHRKSAAAHKGHDKPISVLLSKNKPSEEYGLRLGSQI 340

  Fly   419 FVKEISSKAREQLNANGYSLQEGDIITRIHNTNCGDTMSLKEAKKIIDGCKERLNLVVLRDITNQ 483
            |:||:::....:.:.|   |.||||:.:|:.| ..:.|||.:|:|:|:..:.:|.|:|.|| .:|
 Frog   341 FIKEMTNTGLARRDGN---LHEGDIVLKINGT-VTENMSLTDARKLIERSRGKLQLLVQRD-ASQ 400

  Fly   484 TAVSQLNLNNSASHQASGNIYATHQPQVSGCSSSNNNLEDPYLPGGASYSSQNLYVQPPTRTSNG 548
            |.::...|::|.|.  .|:|.....      :.||:.|||..|....|:||.....:..:...:.
 Frog   401 TLINIPALDDSDSD--IGDISDIES------NRSNSPLEDSRLQHSDSHSSTEKLKEKSSSKEDP 457

  Fly   549 PNINGNGLNDEKSNLTPRGRSRGPIMDGVSLQQLDRPVTPTRGRSAAIDEPPRPPPPRGSSGGAA 613
            ||                           .|.::....||.:    .:.....|||...||    
 Frog   458 PN---------------------------RLAKMGAMPTPFK----VVGTTETPPPVSVSS---- 487

  Fly   614 QEDFYSSRRQLYEERQSAE---------------------------PRFISFQKEGSVGIRLTGG 651
                 .|...:.||.|..|                           .:.|.|.|..:||:||.||
 Frog   488 -----VSSENIKEEEQEEEAPVELPVAAPKVFLQPSPEDEEIYGPGTKMIKFVKGDTVGMRLAGG 547

  Fly   652 NEAGIFVTAVQPGSPASLQGLMPGDKILKVNDMDMNGVTREEAVLFLLSLQ--DRIDLIVQYCKE 714
            |:.|||:..||.||.|..|||..||::||||..|..|:.||||||:||.:.  :.:.::.|...:
 Frog   548 NDVGIFIAGVQEGSAAEQQGLQEGDQLLKVNTQDFRGIAREEAVLYLLDVPKGEEVIILTQSRSD 612

  Fly   715 EYDEVVTNQRGDSFHIKTHFHCDNPSKGEMAFKAGDVFRVIDTLHNGVVGSWQVLKIGRGHQEMQ 779
            .|..::...|||||.|:|||..|..:...::|..|::|||:|||::|.:|:|..::|.   .|::
 Frog   613 VYKNILACGRGDSFFIRTHFEYDKEAPQFLSFTRGEIFRVVDTLYDGKLGNWLSVRIA---NELE 674

  Fly   780 RGVIPNKSRAEELATAQFNATKKEMNANESRGNFFRRRRSTHRRSKSLSRENWDDVVFSDSIS-K 843
            :|:||:|||||:||:.|.    .:..|...|.:|: :.|.....:|..:|::.||:....::| |
 Frog   675 KGLIPSKSRAEQLASVQL----AQRGAAGDRADFW-KNRGQRSGAKKNARKSRDDLTTVSAVSTK 734

  Fly   844 FPAYERVVLRHPGFVRPVVLFGPVSDLARERLAKDFPDKFSTPLQDDDKSAATSGKCRIVRLSNI 908
            |||||||:||..||.||||:|||::|:|.|:||.|.|..:.. .:.:.|.|.:.....:|||:.:
 Frog   735 FPAYERVLLREAGFKRPVVVFGPIADVAMEKLATDMPSLYQI-AKTEPKDAGSDKSSGVVRLNTV 798

  Fly   909 RDVMDRGKHALLDITPNAVDRLNYAQFYPVVIFLKTDSKHVIKQLRHGLPKAAHKSSKKLLEQCQ 973
            |.::::.||||||:||.|||.|||.|::|:|:|...|:|..:|.:|..|...::||||||.:|..
 Frog   799 RMIIEQDKHALLDVTPKAVDLLNYTQWFPIVVFFNPDNKQGVKTMRQRLCPTSNKSSKKLYDQAA 863

  Fly   974 KLERVWSHIFSTQIAL-SDEESWYRKLRDSIDLQQSGAVWMSESKPVESLSDD----FLFPMTTS 1033
            ||::..:|:.:..|.| |..:|||..::|.|..||:.|||:||.|......:|    :|..|...
 Frog   864 KLKKTCAHLITATINLNSANDSWYGSIKDVIREQQTQAVWVSEGKADGGEEEDDRMSYLTAMGAD 928

  Fly  1034 RLSYASSPESDLELSPGPSASLSLGNLPQLVKASSDPSIATNQDNLDRDRDIIGEGLPPPYTVPY 1098
            .||..|...||.|.:.|...:.:...|.:||......|..:......|..:.|.:.:|.|     
 Frog   929 YLSCDSRLVSDFEDTDGEGGAYTDNELDELVDDPLPVSAISRSSEPVRQEETIAKPVPEP----- 988

  Fly  1099 DHAVPANPNRRQTMDSSKYSIYGTNVPPQQQQPGVGGDTAAVRPQSLYGINAPDLPPRIDRQSKP 1163
                     |.|...:....:.....||...:|.                     ||::..|||.
 Frog   989 ---------RGQMKKAGSREMLRDPSPPPTFKPE---------------------PPKVKAQSKD 1023

  Fly  1164 G--DIPLNTS--------GSSSRNGTLGR-----SAQERLF-GKAVVQDDV-------------- 1198
            .  |:|.::.        |||..:|...:     :|.:.:| ||.:::..|              
 Frog  1024 DIYDLPRSSEANRSSSSVGSSEISGGSAKAIPPPTAAKPVFPGKPILKAPVTVPSPGTEEVAPIK 1088

  Fly  1199 QAEYITRNALVGSGAAETLD------RQQQQQQQTHASLERQARLNAQLKANGVGAGGGGASTYD 1257
            :...:.::.|......|.:|      |.|:.|:..:|.||...:|                    
 Frog  1089 EEANVPKSVLGKVKIFEKMDFSARAQRLQELQEAQNARLELAQKL-------------------- 1133

  Fly  1258 SVSSYDSYNNTQMAMQNLGRLGPNAPDDLKSVP-----NANGRPLPPTGQSHEYGRTPHDHRSFG 1317
                                      .|:.:||     |...||.|.:.:..|            
 Frog  1134 --------------------------PDIYAVPVKPQKNEQNRPQPTSSRPPE------------ 1160

  Fly  1318 GPNDLNRQSSPGRPHYHDMNASRNIDPRNGTPQR----PSNLGLESSPRK 1363
                  .|..|.|. |.|..||...|......:|    .|..|..|.|.|
 Frog  1161 ------PQKPPSRT-YQDNRASYGSDEEEEEYRRQLADQSKRGYYSQPSK 1203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pydNP_001246998.1 PDZ_signaling 249..334 CDD:238492 49/84 (58%)
PDZ_signaling 396..477 CDD:238492 28/80 (35%)
PDZ_signaling 633..710 CDD:238492 37/78 (47%)
SH3_ZO 729..790 CDD:212793 24/60 (40%)
GuKc 831..1007 CDD:214504 76/177 (43%)
ZU5 2263..2351 CDD:279170
tjp2XP_002935643.2 PDZ_signaling 45..130 CDD:238492 49/84 (58%)
SF-CC1 193..>306 CDD:273721 4/112 (4%)
PDZ_signaling 318..395 CDD:238492 28/80 (35%)
PDZ 531..608 CDD:366185 37/76 (49%)
SH3_ZO-2 623..685 CDD:212960 28/64 (44%)
GuKc 719..898 CDD:214504 77/179 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 111 1.000 Domainoid score I6165
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1175136at2759
OrthoFinder 1 1.000 - - FOG0001438
OrthoInspector 1 1.000 - - otm47496
Panther 1 1.100 - - O PTHR13865
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1692
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.110

Return to query results.
Submit another query.