DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pyd and si:dkey-92j12.5

DIOPT Version :9

Sequence 1:NP_001246998.1 Gene:pyd / 41062 FlyBaseID:FBgn0262614 Length:2395 Species:Drosophila melanogaster
Sequence 2:XP_021332028.1 Gene:si:dkey-92j12.5 / 560912 ZFINID:ZDB-GENE-090313-354 Length:1860 Species:Danio rerio


Alignment Length:1503 Identity:303/1503 - (20%)
Similarity:505/1503 - (33%) Gaps:454/1503 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 RNVDDLLQALGKRDGGDNNSNLLETASTHSSSQRRRFKKGDRTTWEYHTVAVTRVPGYGFGIAVS 266
            :|:...:.||.:.|.......|...|...:..:....:|||              .|.||.|...
Zfish   611 QNIFGSVFALREEDLKSEAPVLSHQAMWENEIEVYELQKGD--------------SGLGFSILDY 661

  Fly   267 GGRDNPHFANGDPSIAVSDVLKGGPA--EDRLQVNDRIISVNGVSLENVEYATAVQVLRDSG-NT 328
            ....||    |...|.:..::.||.|  :.||...||::.||...|.:...|.||.||:.:. .|
Zfish   662 QDPVNP----GRTVIVIRSLVPGGLADRDGRLLPGDRLMFVNQTDLSHASLAQAVHVLKSTALGT 722

  Fly   329 VQLVVKRRVPLNPINAAGA-------VQHQHSHSLSSVGLMANGSGGVAPTPITSLSQPNSLNSS 386
            |::.|.:.:|.|.|...||       .:|.|.||....               .|.||.:.:.:.
Zfish   723 VRIGVTKPLPENDIQDTGAEITGNCHSEHNHQHSTFQT---------------NSHSQKSKMEAE 772

  Fly   387 LVQNASSGQPIKVTLTKGGK---------KDDYGVVLGCRLFVKEISSKAREQLNANGYSLQEGD 442
            .|...|||....:|:.:|..         :|..|:::...:....||...|         |..||
Zfish   773 PVSIPSSGYERTITVVRGNSSLGMTVSALRDGSGIIIRSVVHGGSISKDGR---------LAVGD 828

  Fly   443 IITRIHNTNCGDTMSLKEAKKIIDGCKERLNLVVLRDITNQTAVSQLNLNNSASHQASG-NIYAT 506
            .|..::    |::.:                     ::||..|.:.|.     .|...| ::...
Zfish   829 GIVALN----GESTT---------------------NLTNAQARAMLR-----RHSLIGPDLSVM 863

  Fly   507 HQPQV------SGCSSSNNNLEDPYLPGGASY-SSQNLYVQPPTRTS------NGPNINGNGLND 558
            :.|..      :..|.|...:| .:.|....: .||||..:|....|      :|..:||....:
Zfish   864 YVPAAFLDLHRASYSKSKEEME-IHTPAAVQHRHSQNLPFKPLECISEQQSVVDGKGVNGKTQAE 927

  Fly   559 EKSNLTPRGRSRGPIMDGVSLQQLDRPVTPTRGRSAAIDEPPRPPPPRGSSGGAAQEDFYSSRRQ 623
            |::.   |.....||....:.::|||            |:..:...|...|....:::....|::
Zfish   928 EENE---RIDEHSPIKQRENSKRLDR------------DQKVKNEKPALQSENRHEQEREKDRQR 977

  Fly   624 LYEERQS--------AEPRFISFQKEG------------SVGIRLTGGN-EAGIFVTAVQPGSPA 667
              :|:::        ::||.:...:.|            .:|.||:.|. ..|||:..:...|||
Zfish   978 --DEKETHGRDHTSWSQPRRVKLSRAGGTCLGFSVFGGRGMGSRLSNGEMRRGIFIKHIAEDSPA 1040

  Fly   668 SLQG-LMPGDKILKVNDMDMNGVTREEAVLFLLSLQDRIDLIVQYCK-EEYDEVVTNQRGDSFHI 730
            :... |..||:||:|..:|::..|.||||..:....||::|:||..: .|.|..:.:.|....:.
Zfish  1041 AHNSTLKEGDRILQVQGIDVSDFTHEEAVEAIRRAGDRVELLVQSPQFSEPDNYLEDDRISKTNS 1105

  Fly   731 KTHFHCDNPSK-------GEMAFKAGDVFRVIDTLHNGVVGSWQVLKIGRGHQEMQR-GV--IPN 785
            :.|...:.|:.       ..:.||..:.:::....|:..    .:||:.....|.|. ||  :|.
Zfish  1106 QNHQESEIPNNLSPTFPFSPIPFKRTEDWKLGKPPHSAP----SLLKLPCRPDETQTDGVQRLPE 1166

  Fly   786 KSRAEELATAQFNATKKEMNANESRGNFFRRRRSTHRRSKSLSRENWDDVVFSDSISKFPAYERV 850
            :....|       .|..:.:..|....:.|.:    :|..||..|.   ::|....|..      
Zfish  1167 RPPLPE-------ETSHDHSGQEQTSYWSRMQ----QRYGSLPGEL---LMFDLDCSSH------ 1211

  Fly   851 VLRHPGFVRPVVLFGPVSDLARERLAKDFPDKFSTPLQDDDKSAATSGKCRIVRLSNIRDVMDRG 915
                 |....:.|.|. .|.||.|::. |..:.:.     |.:||..|:.|:             
Zfish  1212 -----GSGLGLCLSGN-RDGARGRMSV-FVSEITA-----DGAAAADGRVRV------------- 1251

  Fly   916 KHALLDIT---------PNAVDRLNYAQFYPV-VIFLKTDSKHVIKQLRHGLPKAAHKSSKKLLE 970
            ...||:|.         .||...:|.|   |. |..|.|.:|.|.||:..|        .:|.::
Zfish  1252 GDELLEINGQVLYGRSHQNATAIINNA---PAKVRILLTRNKAVQKQMTSG--------PEKEMD 1305

  Fly   971 QCQKLERVWSHIFSTQIALSDEESWYRKLRDSIDLQQSGAVWMSE---SKPVESLSDDFLFPM-T 1031
            .|.:   ::..:....|| .|:.|         .|.|.|.:...:   |:..|||:.....|: .
Zfish  1306 SCPE---IYPSVHIDMIA-EDQHS---------VLSQDGRITREDKLKSRSSESLNVGLPAPINA 1357

  Fly  1032 TSRLSYASSPESDLELS---PGPSASLSLGNLPQLVKASSDPSIATNQDNL------DRDRDIIG 1087
            ||....:..|.|...:|   |..|:.:|          |:|.|.|.....:      .|.:..:.
Zfish  1358 TSNHQASCHPASQTPISRCIPPQSSGIS----------SADESTANQSSRIWPHSTSHRAQCSVS 1412

  Fly  1088 EGLPPPYTVPYDHAVPANPNRRQTMDSSKYSI-YGTNVPPQQQQPGVGGDTAAVRPQSLYGINAP 1151
            .   .|.|.|   .:|...|   |:|..|.:. .|.::        |||....:....::.:|..
Zfish  1413 S---DPLTCP---IIPGCIN---TVDICKGTTGLGLSI--------VGGCNTLLGVIVIHEVNKD 1460

  Fly  1152 DLPPRIDRQSKPGDIPLNTSGSSSRNGTLGRSAQERLFGKAVVQDDVQAEYITRNALVGSGAAET 1216
            ....| |.:...||..|..:|...|..|...:..........|:..:..:::|            
Zfish  1461 GAAHR-DGRLWAGDHILEVNGIDLRMATHEEALSVLRLSPQRVRLSIYRDHVT------------ 1512

  Fly  1217 LDRQQQQQQQTHASLERQARLNAQL--------------KANGVG-----AGGGGASTYDSVSSY 1262
             ::..:...|.|...:.....|.:|              |.|..|     ...|||:..|     
Zfish  1513 -EKHSKHTSQKHTPEDMWDLFNVELNLQPRQGLGLCIVGKMNDTGIFVSEITRGGAADVD----- 1571

  Fly  1263 DSYNNTQMAMQNLGR--LGPNAPDDLKSVPNANGRPLPPTGQSH--------------EYGR-TP 1310
                         ||  ||    |.:.||   ||..:....|.|              |..| ..
Zfish  1572 -------------GRLLLG----DQILSV---NGEDIRAASQDHASALLQRCSGSVLLEVARFKA 1616

  Fly  1311 HDHRSFG---GPNDLNRQSSPGRPHY-----HDMNASRNIDPRNGTPQRPSNLGLESSPRKPLVE 1367
            ..|.|:|   |..|:        |.:     || :...|:|.|..|.|:.....:|...|    :
Zfish  1617 SSHYSYGDQVGEVDV--------PLFSCLNTHD-SVDGNVDIRTVTVQKHECDSVELRVR----D 1668

  Fly  1368 TKTDYGKYSRNNSVTQADYTKLPKTAPHGVVPPPNVSNGQGQMNGSGT------------PSSNG 1420
            |....|.|     :::.|.:.|  .|..|::   .:.:....:||:.|            .:|:|
Zfish  1669 TLGHAGMY-----ISKLDASTL--AARSGLL---QLGSRVISINGTQTERLSVAEASFLLKNSSG 1723

  Fly  1421 SGPFKPVPPPKPKNYRPPVQSGGSSGSGGTTPWENGDSGSPRSPNGFYYPPTPSHHHYGQQATPG 1485
            :...:.:|            ||.:.|:..:|...:....||.....:     .:|:|        
Zfish  1724 AVTLQVMP------------SGCADGASISTDRSSLIHSSPGLSENY-----TTHNH-------- 1763

  Fly  1486 SPSNGHMQPPPPQQQQPTYGGSNGNYGQAPPPQSYPQANGYNGNGHHYNGGSGTGPYIAPHRGMP 1550
                         |..|.|             |:.....|..|.|....||.|:.     |..:|
Zfish  1764 -------------QSSPQY-------------QTITLERGSAGLGFSIVGGFGSS-----HGDLP 1797

  Fly  1551 PPIGNLPP 1558
            ..:.|:.|
Zfish  1798 IYVKNIFP 1805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pydNP_001246998.1 PDZ_signaling 249..334 CDD:238492 25/87 (29%)
PDZ_signaling 396..477 CDD:238492 12/89 (13%)
PDZ_signaling 633..710 CDD:238492 28/90 (31%)
SH3_ZO 729..790 CDD:212793 12/70 (17%)
GuKc 831..1007 CDD:214504 38/185 (21%)
ZU5 2263..2351 CDD:279170
si:dkey-92j12.5XP_021332028.1 L27_2 3..58 CDD:312549
PDZ 137..220 CDD:214570
PDZ 231..312 CDD:214570
PDZ_signaling 509..577 CDD:238492
PDZ_signaling 646..727 CDD:238492 28/98 (29%)
PDZ 782..852 CDD:214570 16/108 (15%)
PDZ_signaling 993..1084 CDD:238492 28/90 (31%)
PDZ_signaling 1210..1286 CDD:238492 22/109 (20%)
MPDZ_u10 1367..1424 CDD:318804 15/72 (21%)
PDZ_signaling 1427..1506 CDD:238492 17/87 (20%)
PDZ_signaling 1531..1612 CDD:238492 21/105 (20%)
PDZ_signaling 1649..1729 CDD:238492 17/93 (18%)
PDZ_signaling 1771..1853 CDD:238492 10/40 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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