DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pyd and ERBIN

DIOPT Version :9

Sequence 1:NP_001246998.1 Gene:pyd / 41062 FlyBaseID:FBgn0262614 Length:2395 Species:Drosophila melanogaster
Sequence 2:XP_005248611.1 Gene:ERBIN / 55914 HGNCID:15842 Length:1460 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pydNP_001246998.1 PDZ_signaling 249..334 CDD:238492
PDZ_signaling 396..477 CDD:238492
PDZ_signaling 633..710 CDD:238492
SH3_ZO 729..790 CDD:212793
GuKc 831..1007 CDD:214504
ZU5 2263..2351 CDD:279170
ERBINXP_005248611.1 leucine-rich repeat 24..47 CDD:275380
LRR_8 46..104 CDD:290566
LRR_RI <48..209 CDD:238064
leucine-rich repeat 48..70 CDD:275380
leucine-rich repeat 71..93 CDD:275380
leucine-rich repeat 94..116 CDD:275380
leucine-rich repeat 117..139 CDD:275380
LRR_RI <130..314 CDD:238064
LRR_8 139..194 CDD:290566
leucine-rich repeat 140..162 CDD:275380
leucine-rich repeat 163..185 CDD:275380
leucine-rich repeat 186..208 CDD:275380
leucine-rich repeat 209..231 CDD:275380
LRR_8 230..288 CDD:290566
leucine-rich repeat 255..277 CDD:275380
leucine-rich repeat 278..300 CDD:275380
leucine-rich repeat 301..323 CDD:275380
LRR_8 322..380 CDD:290566
leucine-rich repeat 347..369 CDD:275380
LRR_4 368..411 CDD:289563
leucine-rich repeat 370..390 CDD:275380
PDZ_signaling 1369..1455 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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