DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pyd and Mpp2

DIOPT Version :9

Sequence 1:NP_001246998.1 Gene:pyd / 41062 FlyBaseID:FBgn0262614 Length:2395 Species:Drosophila melanogaster
Sequence 2:NP_001343253.1 Gene:Mpp2 / 50997 MGIID:1858257 Length:569 Species:Mus musculus


Alignment Length:447 Identity:85/447 - (19%)
Similarity:177/447 - (39%) Gaps:112/447 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   644 VGIRLTGGNEAGI---------FVTAVQPGSPASLQGLM-PGDKILKVNDMDMNGVTREEAVLFL 698
            ||||.|.|...|:         .:..:..|...:.|||: .||.|.:||...:....|       
Mouse   158 VGIRKTAGEHLGVTFRVEGGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPR------- 215

  Fly   699 LSLQDRI-----DLIVQYCKEEYDEVVTNQRGDSFHIKTHFHCD------NPSK-GEMAFKAGDV 751
             :||:.:     .:|::......:..:..|    ..:|.||..|      :|.| ..:.|.|||:
Mouse   216 -ALQELLRSASGSVILKIL
PSYQEPHLPRQ----VFVKCHFDYDPARDSLSPCKEAGLRFNAGDL 275

  Fly   752 FRVIDTLHNGVVGSWQVLKIGRGHQEMQRGVIPNKSRAEELATAQFNATKKEMNANESRGNFF-- 814
            .:::   :......||...:..|    ..|:||::...|:...    ..|:::....:.|...  
Mouse   276 LQIV---NQDDANWWQACHVEGG----SAGLIPSQLLEEKRKA----FVKRDLELTPTSGTLCGS 329

  Fly   815 ----RRRRSTHRRSKSLSRENWDDVVFSDSISKFPAYERVVLRHPGFVRPVVLFGPVSDLARERL 875
                :::|..:..:|:...:..:.::: :.:::.|.:.|         :.:||.| ...:.|..|
Mouse   330 LSGKKKKRMMYLTTKNAEFDRHELLIY-EEVARMPPFRR---------KTLVLIG-AQGVGRRSL 383

  Fly   876 AKDF----PDKFSTPL-------QDDDK-----SAATSGKCRI-------------------VRL 905
            ....    ||::.|.:       :|.::     |..:.|:...                   .|:
Mouse   384 KNKLILWDPDRYGTTVPYTSRRPKDSEREGQGYSFVSRGEMEADIRAGRYLEHGEYEGNLYGTRI 448

  Fly   906 SNIRDVMDRGKHALLDITPNAVDRLNYAQFYPVVIFLKTDSKHVIKQLRHGLPKAAHKSS----- 965
            .:||.|:..||..:||:.|.||..|..|:|.|.|:|::......::.:.    :||.:|.     
Mouse   449 DSIRGVVASGKVCVLDVNPQAVKVLRTAEFVPYVVFIEAPDYETLRAMN----RAALESGVSTKQ 509

  Fly   966 ------KKLLEQCQKLERVWSHIFSTQIALSDEESWYRKLRDSIDLQQSGAVWMSES 1016
                  ::.:|:..:::|.:.|.|...:..|:.|..:|:|:.:::..::...|:..|
Mouse   510 LTEADLRRTVEESSRIQRGYGHYFDLSLVNSNLERTFRELQTAMEKLRTEPQWVPVS 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pydNP_001246998.1 PDZ_signaling 249..334 CDD:238492
PDZ_signaling 396..477 CDD:238492
PDZ_signaling 633..710 CDD:238492 20/80 (25%)
SH3_ZO 729..790 CDD:212793 16/67 (24%)
GuKc 831..1007 CDD:214504 41/221 (19%)
ZU5 2263..2351 CDD:279170
Mpp2NP_001343253.1 L27 30..83 CDD:197794
L27 85..136 CDD:308467
PDZ_signaling 155..233 CDD:238492 20/82 (24%)
SH3_MPP2 246..304 CDD:212970 16/64 (25%)
GuKc 376..557 CDD:214504 36/184 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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