DRSC/TRiP Functional Genomics Resources

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Protein Alignment pyd and dlg1b

DIOPT Version :9

Sequence 1:NP_001246998.1 Gene:pyd / 41062 FlyBaseID:FBgn0262614 Length:2395 Species:Drosophila melanogaster
Sequence 2:XP_009295207.1 Gene:dlg1b / 497648 ZFINID:ZDB-GENE-050222-3 Length:990 Species:Danio rerio


Alignment Length:901 Identity:205/901 - (22%)
Similarity:349/901 - (38%) Gaps:282/901 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 NSNLLETASTHSSSQRRRFKKGDRTTWEYHTVAVTRVPGYGFGIAVSGGRDNPHFANGDPSIAVS 284
            |:..|::|.         :..|....:||..:.:.| ...|.|.:::||.||||... ||||.::
Zfish   266 NTESLDSAP---------YVNGTEADFEYEEITLER-GNSGLGFSIAGGTDNPHIGE-DPSIFIT 319

  Fly   285 DVLKGGPA--EDRLQVNDRIISVNGVSLENVEYATAVQVLRDSGNTVQLVVKRRVPLNP------ 341
            .|:.||.|  :.||:|||.|:.||.|.:.:|.::.||:.|:::|:.|:|.|:||...:.      
Zfish   320 KVIPGGAAAQDGRLRVNDVILRVNEVDVRDVTHSKAVEALKEAGSLVRLYVRRRKSASEKVMEIK 384

  Fly   342 ---------INAAGAVQHQHSHSLSSVGLMANGSGGVAPTPITSLSQPNSLNSSLVQNASSGQPI 397
                     .:.||.|.:||....:|:.:.....||.|                           
Zfish   385 LIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAA--------------------------- 422

  Fly   398 KVTLTKGGKKDDYGVVLGCRLFVKEISSKAREQLNANGYSLQEGDIITRIHNTNCGDTMSLKEAK 462
                .|.|:     :.:|.:|..  ::|...|::.       ....:|.:.||  .|.:.||.||
Zfish   423 ----HKDGR-----LQIGDKLLA--VNSSCLEEVT-------HEHAVTALKNT--PDVVYLKVAK 467

  Fly   463 KIIDGCKERLNLVVLRDITNQTAVSQLNLNNSASHQASGNIYATHQPQVSGCSSSNNNLEDPYLP 527
            .                       :.:.:|:|.:.....|.|:.|.         .|::..|   
Zfish   468 P-----------------------NSVFMNDSFAPPDITNSYSQHM---------ENHISPP--- 497

  Fly   528 GGASYSSQNLYVQPPTRTSNGPNINGNGLNDEKSNLTPRGRSRGPIMDGVSLQQLDRPVTPTRGR 592
               ||.||.|   ||..:                     ||                 .:||...
Zfish   498 ---SYLSQPL---PPVHS---------------------GR-----------------FSPTPKT 518

  Fly   593 SAAIDEPPRPPPP----RGSSGGAAQEDFYSSRRQLYEERQSAEPRFISFQKEGSVGIRLTGGNE 653
            :...|:..|.|..    ||::|                                 :|..:.||.:
Zfish   519 TVGDDDVTREPRKVVLHRGTTG---------------------------------LGFNIVGGED 550

  Fly   654 A-GIFVTAVQPGSPASLQG-LMPGDKILKVNDMDMNGVTREEAVLFLLSLQDRIDLIVQYCKEEY 716
            . |||::.:..|.||.|.| |..||:::.||.:|:.|.|.|:|...|.:....:.::.||..|||
Zfish   551 GEGIFISFILAGGPADLCGELRKGDRLVSVNGIDLRGATHEQAAAALKNAGQTVTIVAQYRPEEY 615

  Fly   717 D-----------------------EVVTNQRGDSFHIKTHFHCDN------PSKGEMAFKAGDVF 752
            .                       .:.|:|: .|.:::..|..|.      ||:| :.||.||:.
Zfish   616 SRFEAKIHDLREQMMNSSISSGSGSLRTSQK-RSLYVRALFDYDKTKDSGLPSQG-LNFKFGDIL 678

  Fly   753 RVIDTLHNGVVGSWQVLKIGRGHQEMQRGVIPNKSRAEE-----LATAQFNATKKEMNA-NESRG 811
            .|::...:   ..||..::....:..:.||||:|.|.|:     |.|.:||:..:|..: |:.|.
Zfish   679 HVVNASDD---EWWQARQVTAQGEVEEMGVIPSKRRVEKKERARLKTVKFNSKSREKGSLNDKRK 740

  Fly   812 NFFRRRRSTHRRSKSLSRENWDDVV------FSDSISKFPAYERVVLRHP-------GFVRPVVL 863
            .....|:.|..::|.:|.:...||.      .|||.|.:...|..||.:.       .:.|||::
Zfish   741 KNLFSRKFTFYKNKDVSEQETSDVEQHVTSNASDSESSYRGQEEYVLSYEPVSQQEVNYSRPVII 805

  Fly   864 FGPVSDLARERLAKDFPDKFST-------PLQD---------------------DDKSAATSGKC 900
            .||:.|...:.|..:|||||.:       |.:|                     .:.....:|:.
Zfish   806 LGPMKDRVNDDLISEFPDKFGSCVPHTTRPKRDYEVDGRDYHFVVSREQMERDIQEHKFIEAGQY 870

  Fly   901 RI----VRLSNIRDVMDRGKHALLDITPNAVDRLNYAQFYPVVIFLKTDSKHVIKQLRHGLPKAA 961
            ..    ..:.::|:|.::|||.:||::.||:.||..|..||:.||:|..|...|.::...|   .
Zfish   871 NSHLYGTSVQSVREVAEKGKHCILDVSGNAIKRLQVAMLYPIGIFIKPKSVENIMEMNKRL---T 932

  Fly   962 HKSSKKLLEQCQKLERVWSHIFSTQIALSDEESWYRKLRDSIDLQQSGAVWMSESK 1017
            .:..:|..::..|||:.:...|:..:.....|..|.:::..|:.|....:|: :||
Zfish   933 EEQGRKTYDRAMKLEQEFMEHFTAIVQGDTLEEIYDQVKQIIEEQSGPYIWV-QSK 987

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pydNP_001246998.1 PDZ_signaling 249..334 CDD:238492 33/86 (38%)
PDZ_signaling 396..477 CDD:238492 14/80 (18%)
PDZ_signaling 633..710 CDD:238492 22/78 (28%)
SH3_ZO 729..790 CDD:212793 18/66 (27%)
GuKc 831..1007 CDD:214504 52/220 (24%)
ZU5 2263..2351 CDD:279170
dlg1bXP_009295207.1 L27_1 4..62 CDD:286187
MAGUK_N_PEST 130..286 CDD:287565 5/28 (18%)
PDZ_signaling 287..371 CDD:238492 33/85 (39%)
PDZ_signaling 380..466 CDD:238492 21/132 (16%)
PDZ_assoc 467..530 CDD:287558 21/141 (15%)
PDZ_signaling 529..607 CDD:238492 26/110 (24%)
SH3_DLG1 647..713 CDD:212964 19/69 (28%)
Guanylate_kin 799..977 CDD:279019 43/180 (24%)
GuKc 810..977 CDD:214504 38/169 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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