DRSC/TRiP Functional Genomics Resources

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Protein Alignment pyd and Card9

DIOPT Version :9

Sequence 1:NP_001246998.1 Gene:pyd / 41062 FlyBaseID:FBgn0262614 Length:2395 Species:Drosophila melanogaster
Sequence 2:XP_006498198.1 Gene:Card9 / 332579 MGIID:2685628 Length:542 Species:Mus musculus


Alignment Length:320 Identity:66/320 - (20%)
Similarity:120/320 - (37%) Gaps:81/320 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1928 EEEPLYQSRREMQREMQRNHLYQSK-REMQERISQGKRD--------MEREFSPQSSSSQSEASN 1983
            |:.|..:...|:|:|   ..|.|:: :|:|..:.:||.|        :|.::.......|.:.| 
Mouse   239 EQRPSQELLWELQQE---KDLLQARVQELQVSVQEGKLDRNSPYIQVLEEDWRQALQEHQKQVS- 299

  Fly  1984 SEAIYQSRREAKES-ALKTRS------------QLRD--QIYQTRREALDSMAEPIYVSK-RGMG 2032
              .|:..|::.::: .|:.|.            .||.  ::|:.|.||:....|.:.:.: :.|.
Mouse   300 --TIFSLRKDLRQAETLRARCTEEKEMFELQCLALRKDAKMYKDRIEAILLQMEEVSIERDQAMA 362

  Fly  2033 RPAPIYETREESILQSRENETDEKKEKEC------KTEQIQVEI----------NAQPEEQIEDS 2081
                   :|||...|..::..|:.|.::.      |.:::|:::          ..:.::|..|.
Mouse   363 -------SREELHAQCTQSFQDKDKLRKLVRELGEKADELQLQLFQTESRLLAAEGRLKQQQLDM 420

  Fly  2082 TLSRSDLQKSSDTVIENPARAPLVQDEVDD----DEEEEVQDQRDPAESSA----DQTEQPTAIE 2138
            .:..|||:.||.   .|.....|.||..:|    |:....|.||.|.|.:|    :..|.|....
Mouse   421 LILSSDLEDSSP---RNSQELSLPQDLEEDAQLSDKGHGAQQQRAPGEGAAAPQGELRELPQVWG 482

  Fly  2139 NN------------LHNEGMVEQSQNDSDDVFEAADK----VSPLAPPPAPVQPPTPRSG 2182
            ..            .|..|.....::.........:|    :...|..|.|..|..||.|
Mouse   483 GGQDGWRVGHLCLPAHTAGPTGSGRSARCRTAGGREKGIAGIRQAATTPTPRAPSEPRRG 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pydNP_001246998.1 PDZ_signaling 249..334 CDD:238492
PDZ_signaling 396..477 CDD:238492
PDZ_signaling 633..710 CDD:238492
SH3_ZO 729..790 CDD:212793
GuKc 831..1007 CDD:214504
ZU5 2263..2351 CDD:279170
Card9XP_006498198.1 CARD_CARD9 10..95 CDD:260071
SMC_prok_B <154..>417 CDD:274008 35/190 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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