DRSC/TRiP Functional Genomics Resources

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Protein Alignment pyd and Mpp7

DIOPT Version :9

Sequence 1:NP_001246998.1 Gene:pyd / 41062 FlyBaseID:FBgn0262614 Length:2395 Species:Drosophila melanogaster
Sequence 2:XP_017456050.1 Gene:Mpp7 / 307035 RGDID:1305675 Length:601 Species:Rattus norvegicus


Alignment Length:589 Identity:131/589 - (22%)
Similarity:211/589 - (35%) Gaps:166/589 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   540 QPPTRTSNGPNINGNGLNDEKSNLTPRGRSRGPIMDGVSLQQLDRP-------VTPTRGRSAAID 597
            |.|....:|.....:.|.||..|..|....|      ..|:.|.:|       |..|..:.:.  
  Rat    63 QSPVPILHGAAALADDLADELQNKPPNSEIR------ELLKLLSKPNVKALLSVHDTVAQKSY-- 119

  Fly   598 EPPRPPPPRGSSGGAAQEDFYSSRRQLYEERQSAEPRFISFQKEGSVGIRLTGGNEAGIFVTAVQ 662
            :|..||.|.....   :||.....|.:    ::.||...:.:|:...|         .|.|..:.
  Rat   120 DPVLPPMPDDIDD---EEDSVKIIRLV----KNREPLGATIKKDEQTG---------AITVARIM 168

  Fly   663 PGSPASLQGLM-PGDKILKVNDMDMNGVTREEAVLFLLSLQDRIDL-IVQYCKEEYDEVVTNQRG 725
            .|..|...||: .||::.:||.:.:.....||.:..|...|..|.. |:...|||    :.::.|
  Rat   169 RGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILSQSQGAITFKIIPSTKEE----IPSKEG 229

  Fly   726 DSFHIKTHFHCDN------PSK-GEMAFKAGDVFRVIDTLHNGVVGSWQVLKIGRGHQEMQRGVI 783
            ..| ||..|..|.      |.| ..::|:.||:.:::....    .:|...| ..|....:.|:|
  Rat   230 KIF-IKALFDYDPKEDKAIPCKEAGLSFRKGDILQIMSQDD----ATWWQAK-HEGDTNPRAGLI 288

  Fly   784 PNKS--------RAEELATAQFNATKKEM--------NANESRGN--------------FFRRRR 818
            |:|.        |..|:.......:.::.        ...|..|:              .||..|
  Rat   289 PSKHFQERRLALRRPEIVVQPLKLSNRKSYEETVECEEIKEDAGHDGNNSGPYIAGFRRSFRLSR 353

  Fly   819 STHRRSKSL----SRENWD--DVVFSDSISKFPAYERVV----LRHPGFVRPVVLFGPV----SD 869
            ...:.:||:    ..|.:|  ||         |.||.|.    ..|..: |.|||.|||    ::
  Rat   354 KDKKTNKSMYECKKSEQYDTADV---------PTYEEVTPYRRQTHDKY-RLVVLVGPVGVGLNE 408

  Fly   870 LARERLAKD--------------------------FPDK--FSTPLQDD---------DKSAATS 897
            |.|:.|..|                          |..|  |.|.:|::         :....||
  Rat   409 LKRKLLMSDTQHYGVTVPHTTRARRSQESDGVEYIFISKHLFETDVQNNKFIEYGEYKNNYYGTS 473

  Fly   898 GKCRIVRLSNIRDVMDRGKHALLDITPNAVDRLNYAQFYPVVIFLKTDSKHVIKQLRHGLPKAAH 962
                   :.::|.|:.:.|..|||:.|:.|..|...:|.|.|||:|..|   |::||.....|..
  Rat   474 -------IDSVRSVLAKNKVCLLDVQPHTVKHLRTLEFKPYVIFIKPPS---IERLRETRKNAKI 528

  Fly   963 KSSK---------------KLLEQCQKLERVWSHIFSTQIALSDEESWYRKLRDSIDLQQSGAVW 1012
            .||:               ::::..|.:|..:.|:|...|...|....:.:|:.:.|..::.|.|
  Rat   529 ISSRDDQGTAKPFTEEDFQEMIKSAQIMESQYGHLFDKIIINDDLTVAFNELKTTFDKLETDAHW 593

  Fly  1013 MSES 1016
            :..|
  Rat   594 VPVS 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pydNP_001246998.1 PDZ_signaling 249..334 CDD:238492
PDZ_signaling 396..477 CDD:238492
PDZ_signaling 633..710 CDD:238492 19/78 (24%)
SH3_ZO 729..790 CDD:212793 17/75 (23%)
GuKc 831..1007 CDD:214504 56/237 (24%)
ZU5 2263..2351 CDD:279170
Mpp7XP_017456050.1 L27 16..68 CDD:197794 2/4 (50%)
L27 <88..125 CDD:197794 8/44 (18%)
PDZ_signaling 137..217 CDD:238492 20/92 (22%)
SH3_MPP7 232..292 CDD:212966 16/65 (25%)
GuKc 409..588 CDD:214504 41/188 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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