DRSC/TRiP Functional Genomics Resources

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Protein Alignment pyd and FRMPD2

DIOPT Version :9

Sequence 1:NP_001246998.1 Gene:pyd / 41062 FlyBaseID:FBgn0262614 Length:2395 Species:Drosophila melanogaster
Sequence 2:NP_001018081.4 Gene:FRMPD2 / 143162 HGNCID:28572 Length:1309 Species:Homo sapiens


Alignment Length:694 Identity:127/694 - (18%)
Similarity:215/694 - (30%) Gaps:309/694 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 STHSSSQRRRFK----KGDRTTWEYHTVAVTRVPGYGFGIAVSGGRDNPHFANGDPSIAVSDVLK 288
            |.|:.|:..|.|    :..|   |...|.:.|.|..|||..::.|.   :....||.|.:|.::.
Human   752 SMHAGSKNNRRKSFIAEPGR---EIVRVTLKRDPHRGFGFVINEGE---YSGQADPGIFISSIIP 810

  Fly   289 GGPAE--DRLQVNDRIISVNGVSLENVEYATAVQVLRDSGNTVQLVVKRRVPLNPINAAGAVQHQ 351
            |||||  ..::...:|:::|.:|||...:..||:::::|.:.::|::.:                
Human   811 GGPAEKAKTIKPGGQILALNHISLEGFTFNMAVRMIQNSPDNIELIISQ---------------- 859

  Fly   352 HSHSLSSVGLMANGSGGVAPTPITSLSQPNSLNSSLVQNASSGQPIKVTLTKGGKKDDYGVVLGC 416
                          |.||                                  ||...|       
Human   860 --------------SKGV----------------------------------GGNNPD------- 869

  Fly   417 RLFVKEISSKAREQLNANGYSLQEGDIITRIHNTNCGDTMSLKEAKKIIDGCKERLNLVVLRDIT 481
                                                       |.|                   
Human   870 -------------------------------------------EEK------------------- 872

  Fly   482 NQTAVSQLNLNNSASHQASGNIYATHQPQVSGCSSSNNNLEDPYLPGGASYSSQNLYVQPPTRTS 546
            |.||.|.::..:..|....|::.:..|.|       :.|.|:..:.|          ||      
Human   873 NSTANSGVSSTDILSFGYQGSLLSHTQDQ-------DRNTEELDMAG----------VQ------ 914

  Fly   547 NGPNINGNGLNDEKSNLTPRGRSRGPIMDGVSLQQLDRPVTPTRGRSAAIDEPPRPPPPRGSSGG 611
                           :|.||.|           .||.  ..|.:|..::.  ||.||        
Human   915 ---------------SLVPRLR-----------HQLS--FLPLKGAGSSC--PPSPP-------- 941

  Fly   612 AAQEDFYSSRRQLYEERQSAEPRFISFQKE-GSVGIRLTGGNE-----AGIFVTAVQPGSPASLQ 670
                           |..:.|..|:...|| |::|..:|||..     .||:|.::.||.||:.:
Human   942 ---------------EISAGEIYFVELVKEDGTLGFSVTGGINTSVPYGGIYVKSIVPGGPAAKE 991

  Fly   671 G-LMPGDKILKVNDMDMNGVTREEAVLFL--------LSLQDRIDLIVQYCKEEYDEV------- 719
            | ::.||::|:|:.:.:.|:|.::||..|        |.|:.|:....|.|....|.:       
Human   992 GQILQGDRLLQVDGVILCGLTHKQAVQCLTGPGQVARLVLERRVPRSTQQCPSANDSMGDERTAV 1056

  Fly   720 -------------VTNQRGDSFHIK--------------------THFHCD----------NPSK 741
                         |:...|..|.:|                    :|...|          .|::
Human  1057 SLVTALPGRPSSCVSVTDGPKFEVKLKKNANGLGFSFVQMEKESCSHLKSDLVRIKRLFPGQPAE 1121

  Fly   742 GEMAFKAGDVFRVIDTLHNGVVGSWQVLKIGRG-HQEM-------QRGVIPNKSRAEELATAQFN 798
            ...|..|||:...::......:...:||.:.|| .||:       ..|.:|...  :|..|.:.:
Human  1122 ENGAIAAGDIILAVNGRSTEGLIFQEVLHLLRGAPQEVTLLLCRPPPGALPELE--QEWQTPELS 1184

  Fly   799 ATKKEMNANESRGNFFRRRRSTHRRSKSL--SRENWDDVVFSDS 840
            |.|:           |.|...|...:..:  ..::|.|....|:
Human  1185 ADKE-----------FTRATCTDSCTSPILDQEDSWRDSASPDA 1217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pydNP_001246998.1 PDZ_signaling 249..334 CDD:238492 25/86 (29%)
PDZ_signaling 396..477 CDD:238492 5/80 (6%)
PDZ_signaling 633..710 CDD:238492 28/91 (31%)
SH3_ZO 729..790 CDD:212793 16/98 (16%)
GuKc 831..1007 CDD:214504 3/10 (30%)
ZU5 2263..2351 CDD:279170
FRMPD2NP_001018081.4 KIND 15..197 CDD:214801
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..249
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 266..302
B41 346..550 CDD:214604
FERM_C_PTPH13 546..647 CDD:270008
PDZ_signaling 773..857 CDD:238492 25/86 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 859..880 12/153 (8%)
PDZ 947..1034 CDD:214570 28/86 (33%)
PDZ 1078..1167 CDD:214570 15/88 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1204..1228 3/14 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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