DRSC/TRiP Functional Genomics Resources

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Protein Alignment pyd and mpdz

DIOPT Version :9

Sequence 1:NP_001246998.1 Gene:pyd / 41062 FlyBaseID:FBgn0262614 Length:2395 Species:Drosophila melanogaster
Sequence 2:XP_002940172.2 Gene:mpdz / 100488270 XenbaseID:XB-GENE-994032 Length:2164 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pydNP_001246998.1 PDZ_signaling 249..334 CDD:238492
PDZ_signaling 396..477 CDD:238492
PDZ_signaling 633..710 CDD:238492
SH3_ZO 729..790 CDD:212793
GuKc 831..1007 CDD:214504
ZU5 2263..2351 CDD:279170
mpdzXP_002940172.2 L27_2 6..63 CDD:312549
PDZ_signaling 139..225 CDD:238492
PDZ_signaling 259..338 CDD:238492
PDZ 380..467 CDD:214570
PDZ_signaling 560..629 CDD:238492
PDZ 726..814 CDD:214570
PDZ 1038..1108 CDD:214570
PDZ_signaling 1195..1286 CDD:238492
PDZ 1440..1526 CDD:214570
PDZ 1574..1657 CDD:214570
MPDZ_u10 1662..1722 CDD:374710
PDZ 1723..1807 CDD:214570
PDZ_signaling 1819..1899 CDD:238492
PDZ_signaling 1954..2039 CDD:238492
PDZ_signaling 2080..2163 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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