DRSC/TRiP Functional Genomics Resources

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Protein Alignment hng2 and CG9948

DIOPT Version :9

Sequence 1:NP_649837.1 Gene:hng2 / 41056 FlyBaseID:FBgn0037634 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_001261492.1 Gene:CG9948 / 38757 FlyBaseID:FBgn0035721 Length:218 Species:Drosophila melanogaster


Alignment Length:233 Identity:48/233 - (20%)
Similarity:90/233 - (38%) Gaps:62/233 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 YEFIDAVHKRSIIWERSH-PNFHNRELRDEAWQQIGHELCSNFDDSSEPEKQEIVKTLLKRWKNT 82
            ::.||.|....::::||. .|:...:.:.:.|.:|...:..:.|            ..|.||.|.
  Fly    13 FKLIDLVEPNPVLYKRSGLSNYDAMKAKTDIWARIAEMMGCDVD------------FCLMRWNNL 65

  Fly    83 RDSYLR-VNRLRQSGEEVARASYIYEKELSFLLNVKAESEDDVESLKEQPKPQAKRKRVSTAAQR 146
            ...:.: ..|...||     :::.|.:.|.||..::..|:     :|.:||...:...:.|    
  Fly    66 HYQFRKEFRRADTSG-----STWPYLERLRFLAEIQPPSK-----VKTKPKTNKQEATIQT---- 116

  Fly   147 SAKTPRK------RNSD--QESN---IEPAIRNPAIPSNINTVLGDLGCAKEDTATPEIAYIPQL 200
              :||.:      .:.|  |:|:   ||..|..|:                |.....||.|..|.
  Fly   117 --ETPVQFLWDTFEDGDVPQQSSTFIIEEVIEEPS----------------EQIIQEEIIYEEQE 163

  Fly   201 PSDPPCSTNTAYLSADPDQAFFDTIKPHMQQMCADRKL 238
            |:: ..|..:::|..  ||......:|  |:..|:|::
  Fly   164 PAE-IISPRSSFLQM--DQILAQLKEP--QRRRAERRI 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hng2NP_649837.1 MADF_DNA_bdg 21..113 CDD:287510 18/93 (19%)
BESS 216..250 CDD:281011 6/23 (26%)
CG9948NP_001261492.1 MADF 14..95 CDD:214738 20/97 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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