DRSC/TRiP Functional Genomics Resources

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Protein Alignment hng2 and madf-10

DIOPT Version :9

Sequence 1:NP_649837.1 Gene:hng2 / 41056 FlyBaseID:FBgn0037634 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_492729.1 Gene:madf-10 / 190925 WormBaseID:WBGene00013717 Length:234 Species:Caenorhabditis elegans


Alignment Length:206 Identity:40/206 - (19%)
Similarity:84/206 - (40%) Gaps:53/206 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VLRSAGSNLRYSMYEFIDAVHKRSIIWERSHPNFHNRELRDEAWQQIGHELCSNFDDSSEPEKQE 70
            ::|....::|::|.|   |:..|..:|:.:      ||....|.::      :.|.:..|...|:
 Worm    41 MMRQVTDSVRFAMCE---AIAHRPGLWDST------REKVSSAARK------NLFAEVVEVINQQ 90

  Fly    71 IV-------KTLLKRWKNTRDSYLRVNR---LRQSGEEVARASYIYEKELSFLLNVKAESEDDVE 125
            .|       :.:.|.|||.:|:|::..|   ....|..: |..:.:...|.||.:|   :::|. 
 Worm    91 FVLSPPLTIEEIEKHWKNLKDTYVKTRRKLTFDHDGCPI-RPKWKFFDSLMFLDSV---NQNDF- 150

  Fly   126 SLKEQPK------------PQAKRKRVSTAAQ-------RSAKTPRKRNSDQES----NIEPAIR 167
            .:|::|.            |.:|::::.....       ||...|.|....::.    .|:.:||
 Worm   151 VMKKRPMQFQGQPYDLYQGPSSKKEKLEEMPSDEYMEFCRSLYLPLKEIGYKDRIHWLKIQKSIR 215

  Fly   168 NPAIPSNINTV 178
            :....:.:.:|
 Worm   216 DIVYEAQLESV 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hng2NP_649837.1 MADF_DNA_bdg 21..113 CDD:287510 20/101 (20%)
BESS 216..250 CDD:281011
madf-10NP_492729.1 MADF 53..147 CDD:214738 25/112 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156205
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001895
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.930

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