DRSC/TRiP Functional Genomics Resources

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Protein Alignment hng2 and madf-8

DIOPT Version :9

Sequence 1:NP_649837.1 Gene:hng2 / 41056 FlyBaseID:FBgn0037634 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_497739.1 Gene:madf-8 / 183517 WormBaseID:WBGene00008118 Length:300 Species:Caenorhabditis elegans


Alignment Length:98 Identity:28/98 - (28%)
Similarity:44/98 - (44%) Gaps:20/98 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MYEFIDAVHKRSIIWERSHPNFHNRELRDEAWQQIGHELCSNFDDSSEPEKQEIVKTLLKRWKNT 82
            :|:.|.||.||.|:|::......|..|...||.|:..||  ..|:.....:::.:      ||:.
 Worm   133 VYDIIYAVRKRPILWDQRLICHRNSNLSRRAWDQLDLEL--GIDEEYPLARRKQI------WKSK 189

  Fly    83 RDSYL-RVN--RLRQSGEEVARASYIYEKELSF 112
            ||.:: .||  .||:         :||...|.|
 Worm   190 RDYFVSAVNAANLRK---------WIYADALEF 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hng2NP_649837.1 MADF_DNA_bdg 21..113 CDD:287510 27/95 (28%)
BESS 216..250 CDD:281011
madf-8NP_497739.1 MADF 135..219 CDD:214738 27/96 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156213
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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