DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9839 and PGBD3

DIOPT Version :9

Sequence 1:NP_001262388.1 Gene:CG9839 / 41055 FlyBaseID:FBgn0037633 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_736609.2 Gene:PGBD3 / 267004 HGNCID:19400 Length:593 Species:Homo sapiens


Alignment Length:612 Identity:111/612 - (18%)
Similarity:194/612 - (31%) Gaps:206/612 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 ESDSDEDGYSELDYQAEDVFCQDDMDDYDPDWSSQQTGSRLLFKF--------PIQQSGLKFGQR 137
            |||||:..|:..|...::|  ........|..|.::..:::|.|:        |:       ..|
Human    72 ESDSDDPSYAPKDDSPDEV--PSTFTVQQPPPSRRRKMTKILCKWKKADLTVQPV-------AGR 127

  Fly   138 FQGPQHYFNQVLGNRSKF---------------FSSLAQSCNLKGGELKSNPTTAEEMEIFMALS 187
            ...|.:.|..|:...::.               :|:| .:|: ||..|   ..|:.|.:.|:.:.
Human   128 VTAPPNDFFTVMRTPTEILELFLDDEVIELIVKYSNL-YACS-KGVHL---GLTSSEFKCFLGII 187

  Fly   188 LLMCDLKLEHLSDYWSTNMFYGLVGFSGKIPLERYQQLLHCLNF-DAPQLQAGRAKVKNSLLLDF 251
            .|...:.:.....:|........|..|..:..:|::.:...|:. |...|.......|...|:..
Human   188 FLSGYVSVPRRRMFWEQRTDVHNVLVSAAMRRDRFETIFSNLHVADNANLDPVDKFSKLRPLISK 252

  Fly   252 INERM-----EEIYI--------------CGQQLVLNEPI----TLWKGAL---------RYQDE 284
            :|||.     .|.|.              | :|.:..:||    ..|.||.         .||.:
Human   253 LNERCMKFVPNETYFSFDEFMVPYFGRHGC-KQFIRGKPIRFGYKFWCGATCLGYICWFQPYQGK 316

  Fly   285 LPN----KFRTNALLLHMLTEQSGLVVKILPEIVRKEDAPAWVRNSRQLVEHRNKIVLKLMEGYH 345
            .||    ::...|.|:...:|                                     .|.|.:.
Human   317 NPNTKHEEYGVGASLVLQFSE-------------------------------------ALTEAHP 344

  Fly   346 GGRTVYTSKFYGSYGLAQELAKKSTYCTGL-----LDRNRYGNSKALVHQ-------RLDSNSIS 398
            |......:.|:.|..|..:|:......||.     :||....:..||..:       |:|..   
Human   345 GQYHFVFNNFFTSIALLDKLSSMGHQATGTVRKDHIDRVPLESDVALKKKERGTFDYRIDGK--- 406

  Fly   399 TSYATSLMMAKWRRRAKSLYCFSSD-------CL-AIYSKEMAMQKTNAKPKLIQELEFQLRPGN 455
                 ..::.:|  ...|:...:|.       || :.||:::..:....:|.:|:... |...|.
Human   407 -----GNIVCRW--NDNSVVTVASSGAGIHPLCLVSRYSQKLKKKIQVQQPNMIKVYN-QFMGGV 463

  Fly   456 D-GRHHLIHYQAACKELKANIKLTIFLLNILVYNAYLLYFANGQNARVGHLKSYSEFRVIIIKSL 519
            | ...::..|:|:.:..|......:|...:::.||:.|:            |:|.|..|..::  
Human   464 DRADENIDKYRASIRGKKWYSSPLLFCFELVLQNAWQLH------------KTYDEKPVDFLE-- 514

  Fly   520 LREEVTNEPVTSIQKPETYERSKNKPVPEPRLKTILHEPMLIQQNGKPAKKN------------- 571
            .|..|...          |..:...| |||            .|.|:|.|:|             
Human   515 FRRRVVCH----------YLETHGHP-PEP------------GQKGRPQKRNIDSRYDGINHVIV 556

  Fly   572 -------CRYCHKGGMLQFSRYMCNTC 591
                   |..|||.     :.:.|..|
Human   557 KQGKQTRCAECHKN-----TTFRCEKC 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9839NP_001262388.1 DDE_Tnp_1_7 141..490 CDD:290555 73/421 (17%)
Tnp_zf-ribbon_2 570..602 CDD:290554 7/42 (17%)
PGBD3NP_736609.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..53
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..105 10/34 (29%)
DDE_Tnp_1_7 141..499 CDD:290555 70/411 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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