DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9839 and PGBD2

DIOPT Version :9

Sequence 1:NP_001262388.1 Gene:CG9839 / 41055 FlyBaseID:FBgn0037633 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_733843.1 Gene:PGBD2 / 267002 HGNCID:19399 Length:592 Species:Homo sapiens


Alignment Length:653 Identity:119/653 - (18%)
Similarity:222/653 - (33%) Gaps:196/653 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LVAEQQAASNTIRLELEQQESDSDEDGYSELDYQAED---------------VFCQD-----DMD 106
            |.|.::..||..|.|:.....|:....:::.|...||               |.|:|     |.|
Human    27 LNAMEEEESNNNREEIFIAPPDNAAGEFTDEDSGDEDSQRGAHLPGSVLHASVLCEDSGTGEDND 91

  Fly   107 DYD------------------------PD---WS----------SQQTGSRLLFKFPIQQSGLKF 134
            |.:                        ||   |:          ||:.....||:....:..:.|
Human    92 DLELQPAKKRQKAVVKPQRIWTKRDIRPDFGSWTASDPHIEDLKSQELSPVGLFELFFDEGTINF 156

  Fly   135 GQRFQGPQHYFNQVLGNRSKFFSSLAQSCNLKGGELKSNPTTAEEMEIFMALSLLMCDLKLEHLS 199
                         ::...:::  :..::.||.        .||:|::..:.:.:|...:......
Human   157 -------------IVNETNRY--AWQKNVNLS--------LTAQELKCVLGILILSGYISYPRRR 198

  Fly   200 DYWST--NMFYGLVGFSGKIPLERYQQLLHCLNF-DAPQLQAGR--AKVKNSLLLDFINER---- 255
            .:|.|  :..:.||  :..|..:|::.:...|:| |..:|.|..  |||:..::....|.:    
Human   199 MFWETSPDSHHHLV--ADAIRRDRFELIFSYLHFADNNELDASDRFAKVRPLIIRMNCNFQKHAP 261

  Fly   256 MEEIYICGQ------------QLVLNEPITL----WKGALRYQDELPNKFRTNALLLHMLTEQSG 304
            :||.|..|:            ||...:|:.|    |.|                      |...|
Human   262 LEEFYSFGESMCEYFGHRGSKQLHRGKPVRLGYKIWCG----------------------TTSRG 304

  Fly   305 LVVKILPEIVRKEDAPAWVRNSRQLVEHRNKIVLKLMEG--------YHGGRTVYTSKFYGSYGL 361
            .:|...|     .....:.:..|.| :....:|:|.::.        ||    ::..|.:.|..|
Human   305 YLVWFEP-----SQGTLFTKPDRSL-DLGGSMVIKFVDALQERGFLPYH----IFFDKVFTSVKL 359

  Fly   362 AQELAKKSTYCTGLL-----DRNRYGNSKALVHQRLDSNSISTSYATSLMMAKWRRRAKSLYCFS 421
            ...|.||....||.:     :|....:.|.|...:..|.......:..:::.:|...:....|.:
Human   360 MSILRKKGVKATGTVREYRTERCPLKDPKELKKMKRGSFDYKVDESEEIIVCRWHDSSVVNICSN 424

  Fly   422 S---DCLAIYSKEMAMQKTNA---KPKLIQELEFQLRPGNDGR--HHLIHYQAACKELKANIKLT 478
            :   :.:.:.|:.....||..   :|.|::  .:|.:.|..||  .::..|:...:.:|......
Human   425 AVGIEPVRLTSRHSGAAKTRTQVHQPSLVK--LYQEKVGGVGRMDQNIAKYKVKIRGMKWYSSFI 487

  Fly   479 IFLLNILVYNAYLLYFANGQNARVGHLKSYSEFRVIIIKSLLREEVTNEPVTSIQKPETYERSKN 543
            .::::..:.||:.|:....|:|:|..|........:.::|       |...||      ..|...
Human   488 GYVIDAALNNAWQLHRICCQDAQVDLLAFRRYIACVYLES-------NADTTS------QGRRSR 539

  Fly   544 KPVPEPRLKTILHEPMLIQQNGKPAKKNCRYCHKGGMLQFSRYMCNTCPDKPGLCQE----PCFL 604
            :...|.|...|.|  .:|.|:   .:..|..||.         ..||..:|   ||:    .||.
Human   540 RLETESRFDMIGH--WIIHQD---KRTRCALCHS---------QTNTRCEK---CQKGVHAKCFR 587

  Fly   605 LWH 607
            .:|
Human   588 EYH 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9839NP_001262388.1 DDE_Tnp_1_7 141..490 CDD:290555 67/394 (17%)
Tnp_zf-ribbon_2 570..602 CDD:290554 8/35 (23%)
PGBD2NP_733843.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..69 8/37 (22%)
DDE_Tnp_1_7 140..499 CDD:290555 70/417 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
21.870

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