DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT7 and Cct6b

DIOPT Version :9

Sequence 1:NP_649835.1 Gene:CCT7 / 41054 FlyBaseID:FBgn0037632 Length:544 Species:Drosophila melanogaster
Sequence 2:XP_017452911.1 Gene:Cct6b / 363658 RGDID:1359453 Length:543 Species:Rattus norvegicus


Alignment Length:541 Identity:151/541 - (27%)
Similarity:271/541 - (50%) Gaps:32/541 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IVLLKEGTDSSQGKPQLVSNINACQSIVDAVRTTLGPRGMDKLIVDAHGKATISNDGATIMKLLE 69
            |.:...|.:.::.:..|..||.|.:.:.|.:|.:|||:|..|::|...|...::.||..::..::
  Rat     4 IKIANPGAEVTRSQAALAVNICAARGLQDVLRPSLGPKGALKMLVSGAGDIKLTKDGNVLLHEMQ 68

  Fly    70 IIHPAAKTLVDIAKSQDAEVGDGTTSVVLLAGEFLKQVKPFVEEGVHPRVIIKAIRKALQLCMEK 134
            |.||.|..:..:|.:||...||||||.||:.||.|||...::.||:|||:|.:....|....:|.
  Rat    69 IQHPTASIIAKVAAAQDHITGDGTTSNVLIIGELLKQADLYISEGLHPRIIAEGFDVAKTKALEV 133

  Fly   135 INEMAVQIVEQSKDQQRALLEKCAATAMSSKLIHQQKDFFSRIVVDAVLSLDEL-LPLN--MIGI 196
            ::::.||     |:.:|.:|...|.|::.:|:..:..|..:..|||:||::... :|::  |:.|
  Rat   134 LDKIKVQ-----KEMKREMLLDVARTSLRTKVHTELADILTEAVVDSVLAIRRPGIPIDLFMVEI 193

  Fly   197 KKVTGGSLEESQ------------LVSGVAFKKTFSYAGFEMAPKSYDNCKIALLNIELELKAER 249
            .::...|..::|            ||.|:.....   |......|...:..|.:.|:.||.:...
  Rat   194 VEMRHKSETDTQAGDRTQGLALPRLVRGLVLDHG---ARHPRMKKQVQDAYILICNVSLEYEKTE 255

  Fly   250 DNAEIRVDNVKEYQKVVDAEWQILYNKLAKI--------HESGAN-VVLSKLPIGDVATQYFADR 305
            .::......|:|.:|:|.||.:.:.:::.||        .||... ||:::..|..|:.:..|..
  Rat   256 VSSGFFYKTVEEKEKLVKAERKFIEDRVQKIIDLKQKVCAESNKGFVVINQKGIDPVSLEMLAKH 320

  Fly   306 DIFCAGRVPEEDLKRTMKACGGAVMTTANDIKPNVLGLCEHFEERQVGGERFNLFQGCPNAKTST 370
            :|....|....:|:|...||||..:.:..|:....||......|..:|.|:|...:.|.|..:.|
  Rat   321 NIVALRRAKRRNLERLTLACGGLAVNSLEDLSEECLGHAGLVFEYTLGEEKFTFIEDCVNPLSVT 385

  Fly   371 LILRGGAEQFLEETERSLHDAIMIVRRTIKHDSVVAGGGAIEMELSKLLRDYSRTIAGKEQLLIA 435
            |:::|..:..|.:.:.:|.|.:..|:..|:...||.|.||:|:.:::.|.:|...:.|:.:|.|.
  Rat   386 LLVKGPNKHTLIQIKDALRDGLRAVKNAIEDGCVVPGAGAVEVAIAEALVNYKHCVQGRARLGIQ 450

  Fly   436 AIAKGLEIIPRQLCDNAGFDATNILNKLRQKHAQGGQWYGVDINKEDISDNYEQCVWEPSIIKIN 500
            |.|..|.|||:.|..|:|:|....|.|::.|||:..:..|:|:|..:.....|..:|:...:|.:
  Rat   451 AFADALLIIPKVLAQNSGYDLQETLIKIQTKHAESKELVGIDLNTGEPMVAAEAGIWDNYCVKKH 515

  Fly   501 ALTAAAEAACMILSVDETIKS 521
            .|.:....|..:|.|||.:::
  Rat   516 ILHSCTVIATNVLLVDEIMRA 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT7NP_649835.1 chap_CCT_eta 2..524 CDD:274086 151/541 (28%)
TCP1_eta 4..524 CDD:239456 151/541 (28%)
Cct6bXP_017452911.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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