DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT7 and hspd1

DIOPT Version :9

Sequence 1:NP_649835.1 Gene:CCT7 / 41054 FlyBaseID:FBgn0037632 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001096355.1 Gene:hspd1 / 100124945 XenbaseID:XB-GENE-980059 Length:576 Species:Xenopus tropicalis


Alignment Length:569 Identity:131/569 - (23%)
Similarity:233/569 - (40%) Gaps:95/569 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IVDAVRTTLGPRGMDKLIVDAHGKATISNDGATIMKLLEI----IHPAAKTLVDIAKSQDAEVGD 91
            :.|||..|:||:|...:|..:.|...::.||.|:.|.:::    .:..||.:.|:|.:.:.|.||
 Frog    47 LADAVAVTMGPKGRTVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGAKLVQDVANNTNEEAGD 111

  Fly    92 GTTSVVLLAGEFLKQVKPFVEEGVHPRVIIKAIRKALQLCMEKINEMAVQIVEQSKDQQRALL-- 154
            |||:..:||....|:....:.:|.:|    ..||:.:.:.::       .::::.|:|.:.:.  
 Frog   112 GTTTATVLARSIAKEGFEKISKGANP----VEIRRGVMMAVD-------AVIKELKNQSKPVTTP 165

  Fly   155 EKCAATAMSSKLIHQQKDFFSRIVVDAVLSLDELLPLNMIGIKKVTGGSL--EESQLVSGVAFKK 217
            |:.|..|..|....|:   ..:|:.||:..:...      |:..|..|..  :|.:::.|:.|.:
 Frog   166 EEIAQVATISANGDQE---IGKIISDAMKRVGRR------GVITVKDGKTLHDELEIIEGMKFDR 221

  Fly   218 TFSYAGFEMAPKSYDNCKIA---LLNIELELKAERDNA-EIRVDNVKEYQKVVDAE-------WQ 271
            .:....|....|. ..|:..   ||..|.::.:.:... .:.:.|......|:.||       ..
 Frog   222 GYISPYFINTAKG-QKCEFQDAYLLLSEKKISSVQSIVPALEIANAHRKPLVIIAEDVDGEALST 285

  Fly   272 ILYNKLAKIHESGANVVLSKLP-IGDVATQYFADRDIFCAGRV-PEEDLKRTMKACG-------G 327
            ::.|:|    :.|..||..|.| .||.......|..|...|.| .||.|...::...       |
 Frog   286 LVLNRL----KVGLQVVAVKAPGFGDNRKNQLKDMAISSGGVVFGEEGLTLNIEDIQPHDFGKVG 346

  Fly   328 AVMTTAND------------IKPNVLGLCEHFEERQVGGERFNLFQGCPNAKTSTLILRGGAEQF 380
            .|:.|.:|            |:..:..:.|..|......|:..|.:..........:::.|....
 Frog   347 EVIVTKDDTMLLKGKGDKAQIEKRIQEIHEQLESTNSEYEKEKLNERLAKLSDGVAVIKVGGTSD 411

  Fly   381 LEETERS--LHDAIMIVRRTIKHDSVVAGGGAIEMELSKLLRDYSRTIAGKEQLLIAAIAKGLEI 443
            :|..|:.  :.||:...|..:: :.:|.|||...:.....|.  :...|.::|.:      |:||
 Frog   412 VEVNEKKDRVTDALNATRAAVE-EGIVLGGGCALLRCIPALE--ALNPANEDQRV------GIEI 467

  Fly   444 IPRQL-------CDNAGFDATNILNKLRQKHAQGGQWYGVDINKEDISDNYEQCVWEPSIIKINA 501
            |.|.|       ..|||.:.:.::.|:.|...:    .|.|....:..:..|:.:.:|:.:...|
 Frog   468 IRRTLKIPAMTIAKNAGVEGSLVVEKIIQSPVE----IGYDAMHAEFVNLVEKGIIDPTKVVRTA 528

  Fly   502 LTAAAEAACMILS----VDETIKSPKAGEPPMAG-GGM-GMGRGMGRPM 544
            |..||..|.::.:    |.|..|..|.|  .||| ||| ||..|||..|
 Frog   529 LMDAAGVASLLTTAEAVVTEIPKEEKDG--GMAGMGGMGGMPGGMGGGM 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT7NP_649835.1 chap_CCT_eta 2..524 CDD:274086 117/545 (21%)
TCP1_eta 4..524 CDD:239456 117/545 (21%)
hspd1NP_001096355.1 GroEL 28..548 CDD:239460 115/538 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.