DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir85a and grid1a

DIOPT Version :9

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_021323097.1 Gene:grid1a / 793756 ZFINID:ZDB-GENE-120411-28 Length:1044 Species:Danio rerio


Alignment Length:505 Identity:91/505 - (18%)
Similarity:157/505 - (31%) Gaps:147/505 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 DGRLNAYRYNPFMDNYLIPVDNKPNEVPTLEQLFPKTIPNMQRKPLRMCIYKDDVRAIFWRQGTI 225
            :|.|...|.:..|....:.|      |..||:.|.....|:..:|.|   ||.....:......|
Zfish   423 NGSLRENRADHGMQGITLKV------VTLLEEPFVMVAENILGQPKR---YKGFSIDVLDALAKI 478

  Fly   226 LG---------------------TDGLLAAYVAERLN-ATMMIT-RPHSYNNHNLSSDICFLEVA 267
            ||                     .:|::...:.:|.: |...|| .|...|         .::.:
Zfish   479 LGFKYEMYQVADAKYGSPQTNGSWNGMIGELIGKRADVAISAITITPEREN---------VVDFS 534

  Fly   268 KEYVDVAMNIRFLVPDTFRKQAESTVSHTRDDLCVIVPKAKTAPTFWNIFRSFGSLVWALILVSV 332
            |.|:|.::.|                         ::.|.:.....:::...|...|||.|..::
Zfish   535 KRYLDYSVGI-------------------------LMTKTEERLNIFSLLAPFDLAVWACIAAAI 574

  Fly   333 LVANVFCYIL------KSEVGRVPMQ--------------LFAGALTMPMTQIPPNHSIRLFLIF 377
            .|..|..::|      :|:....|.|              ::...:.........:.::|:.:..
Zfish   575 PVVGVMVFLLRRVQSVRSQNPPGPHQPASVTTSFQSAIWIVYGAFVQQGGESFMSSMALRIAMGS 639

  Fly   378 WLYFGLLICSAFKGNLTSMMVFQPYLPDINQLGALARSHYHIIIRPRHVKHIQHFLTLGHKHESR 442
            |..|.|::||::..||.:.:........|.....|::               |..:..|...||.
Zfish   640 WWLFTLIVCSSYTANLAAYLTVSRMDNAIRTFQDLSK---------------QSEINYGTVRESA 689

  Fly   443 IREQMLEVSDTQMYEMMRNNDIRFAYL-EKYHIARFQVNSRVHMHLG------RPLFHLMNSCLV 500
            :.| ...|..|...|    .|..||.| ...:..:.|.||......|      .|...|.:..::
Zfish   690 VFE-YFRVKGTNPLE----QDSTFAELWRTINKNQGQDNSVTSPAEGIRKVKRDPYAFLWDMAVL 749

  Fly   501 PFHAV--------------------YIVPYGSPYLGFLDSLIRSSHEFG-----FERYWDRIMNS 540
            .:.|:                    ..:.:||||.......|....|.|     .:::|.|....
Zfish   750 EYAALTDDDCTLVVTGNGMSSKGYGLALQHGSPYRDLFSQKILDLQEKGDLDILKQKWWPRKGRC 814

  Fly   541 AFIKSGVKVVNRRRGSGNDEPVVLKLQHFHAVFALWLVGIGMACIVLAWE 590
            ...|         ......|...|:|..|..||.:...|:.:||:|.|.|
Zfish   815 DLDK---------HAEPQTEGRALRLHSFAGVFCILAAGLLLACLVAALE 855

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Ir85aNP_649833.1 None