DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir85a and grik5-like.1

DIOPT Version :9

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001072565.1 Gene:grik5-like.1 / 780020 XenbaseID:XB-GENE-5860197 Length:479 Species:Xenopus tropicalis


Alignment Length:446 Identity:82/446 - (18%)
Similarity:149/446 - (33%) Gaps:149/446 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 ERLNATMMITRPHSYNNHN------------LSSDICFLEVAKEYVDVAM-------NIRFLVPD 283
            :.|..|.::.:|.|....:            |:..:.|....||..|...       |...:|.:
 Frog    41 KHLTVTTIMEQPFSMKTESGMEGFCIDLLSELAQSLGFNYTIKEVKDGRYGAKDQDGNWNGMVGE 105

  Fly   284 TFRKQAE-----STVSHTRD-DLCVIVPKAKTAPT-------------FWNIFRSFGSLVWALIL 329
            ..||:|:     .|::..|: :|....|..:|..:             .:.....|....|..||
 Frog   106 VLRKEADLAVAPLTITGARERELAFTKPFMQTGISILLRKDDVSENSYLFGFLTPFSKETWIGIL 170

  Fly   330 VSVLVANVFCYILKSEVGRV-------------------PMQLFAGALTMPMTQ-IPPNHSIRLF 374
            |:.:|.:: |..|   |||:                   .:....||.|:...: .|.:.|.|:.
 Frog   171 VAYVVTSL-CLFL---VGRLSPCEWTELSTEQNNFNFLNSLWFGVGAFTLQGAEPHPKSVSARII 231

  Fly   375 LIFWLYFGLLICSAFKGNLTSMMVFQPYLPDINQLGALARSHYHIIIRPRHVKHIQHFLTLGHKH 439
            .:.|..|.:::.:|:                |....|...|.      .....:||.|       
 Frog   232 AVIWWIFSIVLVAAY----------------IASFAAFLNSD------SMQTTNIQTF------- 267

  Fly   440 ESRIREQMLE---VSDTQMYEMMRNND-----IRFAYLEKYH----IARF-----QVNSRVHMHL 487
            |..:.::.||   ::.:..::..:|:.     :.:.|::|..    :..|     :|....:..|
 Frog   268 EDLVNQRTLEFGTINSSSTFQFFKNSKNPTYRMIYEYMDKRKDELLVKSFAEGVRRVKESNYAFL 332

  Fly   488 GRPLFHLMNSCLVPFH-----AVYIVP---YG------SPYLGFLDSLIRSSHEFG-----FERY 533
            |.   .:|...:|..|     |..|:.   ||      ||.:..|...|....|.|     .:::
 Frog   333 GE---SVMQDIMVAKHCDLVRAPQIIAGRGYGIAASLDSPLIKPLSVAILEQTESGNIEYLRKKW 394

  Fly   534 WDRIMNSAFIKSGVKVVNRRRGSGNDEPVVLKLQHFHAVFALWLV-GIGMACIVLA 588
            ||...|          :.|..|....:|        |.:..::|: |||:|..|:|
 Frog   395 WDNTCN----------MKRSAGWNPVQP--------HTLGGIFLILGIGLALGVIA 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir85aNP_649833.1 None
grik5-like.1NP_001072565.1 PBP2_iGluR_non_NMDA_like 41..396 CDD:270403 68/390 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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