DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir85a and grid1b

DIOPT Version :9

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_009304811.1 Gene:grid1b / 557511 ZFINID:ZDB-GENE-121214-84 Length:1048 Species:Danio rerio


Alignment Length:554 Identity:106/554 - (19%)
Similarity:167/554 - (30%) Gaps:213/554 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 DGRLNAYRYNPFMDNYLIPVDNKPNEVPTLEQLFPKTIPNMQRKPLRMCIYK----DDVRAIFWR 221
            :|.|...|....|....:.|      |..||..|.....|:..:|.|   ||    |.:.|:   
Zfish   423 NGSLKESRIENGMQGVTVKV------VTLLEDPFVMVAENILGQPKR---YKGFSIDVLEAL--- 475

  Fly   222 QGTILG-----------------TDGLLAAYVAERLN-----ATMMIT-RPHSYNNHNLSSDICF 263
             ..|||                 ::|.....:.|.:|     |...|| .|...|         .
Zfish   476 -AKILGFKYDIYQVADSKYGSQLSNGSWNGMIGELINKRADLAVSAITITPEREN---------V 530

  Fly   264 LEVAKEYVDVAMNIRFLVPDTFRKQAESTVSHTRDDLCVIVPKAKTAPTFWNIFRSFGSLVWALI 328
            ::.:|.|:|.::.|      ..||..|..                   ..:::|..|...|||.|
Zfish   531 VDFSKRYMDYSVGI------LHRKPEEKI-------------------NIFSLFAPFDLAVWACI 570

  Fly   329 LVSVLVANVFCYILKSEVGRVPMQLFAGALTMPMTQIPPN-----------HS------------ 370
            ..::.|..|..::|.             .:.|..:|.||.           ||            
Zfish   571 AAAIPVVGVLIFLLT-------------RMQMLRSQNPPGAHHASSMSNSLHSAIWIVYGAFVQQ 622

  Fly   371 ----------IRLFLIFWLYFGLLICSAFKGNLTSMMVFQPYLPDINQLGALARSHYHIIIRPRH 425
                      :|:.:..|..|.|::||::..||.:.:........|.....|||           
Zfish   623 GGDSVVGSVALRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNTIRTFQDLAR----------- 676

  Fly   426 VKHIQHFLTLGHKHESRIREQM-------LEVSDTQMYEMMRNNDIRFAYLEKYHIARFQVNS-- 481
                |.....|...:|.:.:..       || .|:...|:.|.       :.|.:...|.|:|  
Zfish   677 ----QMDFAYGTVRDSAVYDYFKAKGTNPLE-QDSTYAELWRT-------ISKNNGQDFSVSSPS 729

  Fly   482 -RVHMHLGRPLFHLMNSCLVPFHAV--------------------YIVPYGSPYLGFLDSLIRSS 525
             .:......|...|.:..:|.:.|:                    ..:.:||||...:...|...
Zfish   730 EGIRKAKKGPYAFLWDMAVVEYAALTDDDCTITVSGNSMSSKGYGIAMQHGSPYRDLISQKILEL 794

  Fly   526 HEFG-----FERYWDRI----MNSAFIKSGVKVVNRRRGSGNDEP--VVLKLQHFHAVFALWLVG 579
            .|.|     .:::|.|.    :||               ..|.:|  ..|||..|..||.:...|
Zfish   795 QEKGDLDVLKQKWWPRTGRCDLNS---------------HSNAQPDGRSLKLHSFAGVFCILAAG 844

  Fly   580 IGMACIVLAWE--------------HLTHNYNLA 599
            :.:||:|.|.|              .:|.:|.||
Zfish   845 LLLACLVAALEMWWNSNRCRQEQPKEVTKDYRLA 878

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Ir85aNP_649833.1 None