DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir85a and grid2

DIOPT Version :9

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001004123.1 Gene:grid2 / 448841 ZFINID:ZDB-GENE-040913-1 Length:1009 Species:Danio rerio


Alignment Length:497 Identity:90/497 - (18%)
Similarity:165/497 - (33%) Gaps:136/497 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 VPTLEQLFPKTIPNMQRKPLRMCIYKDDVRAIFWRQGTILGTDGLLAAYVAERLNATMMITRPHS 251
            |..||:.|.....|:..||.:.             ||..:.....||.|:..:..  :.:...|.
Zfish   446 VTVLEEPFVMVSENVLGKPKKY-------------QGFSIDVLDALANYLGFKYE--IYVAPDHK 495

  Fly   252 YNN-------HNLSSDICFLEVAKEYVDVAMNIRFLVPDTFRKQAESTVSHTRD----DLCVIVP 305
            |.:       :.|..::.|     :..||.::...:.|     :.||.|..|..    .:.|::.
Zfish   496 YGSQQADGTWNGLIGELVF-----KRADVGLSALTITP-----ERESVVDFTTRYMDYSVGVLLR 550

  Fly   306 KAKTAPTFWNIFRSFGSLVWALILVSVLVANVFCYIL------KSEVGRV-------PMQLFAGA 357
            ||:.....:.....|...:||.|..:||:.....|:|      :..:|.|       .|....|:
Zfish   551 KAERTVDMFACLAPFDLSLWACIAGTVLLVGTLVYLLNWLNPPRLPMGSVSSTTLYNSMWFVYGS 615

  Fly   358 LTMPMTQIP-PNHSIRLFLIFWLYFGLLICSAFKGNLTSMMVFQPYLPDINQLGALARSHYHIII 421
            ......::| ...:.|:.:..|..|.|::.|::..||.:.:........|..|..||:       
Zfish   616 FVQQGGEVPYTTLATRMMMGVWWLFALIVISSYTANLAAFLTISRIENSIQSLQDLAK------- 673

  Fly   422 RPRHVKHIQHFLTLGHKHESRIREQM---------LEVSDTQMYEMMR-----NNDI-------- 464
                    |..|..|...:|.:.:|:         .:...:||:.|:.     .|::        
Zfish   674 --------QTDLPYGTVLDSAVYDQVRSKGMNPFERDPMYSQMWRMINRTGGAENNVEESKEGIR 730

  Fly   465 -----RFAYLEKYHIARF-QVNSRVHMHLGRPLFHLMNSCLVPFHAVYIVPYGSPYLGFLDSLIR 523
                 |||::....:..: .:|..     ...|:.:.|:.....:.: .:.:||||.......|.
Zfish   731 KVKYGRFAFVWDAAVLEYVAINDE-----DCSLYTVSNNVADRGYGM-AMQHGSPYRDIFSQRIL 789

  Fly   524 SSHEFGFE-----RYWDRIMNSAFIKSGVKVVNRRRGSGNDEPVVLKLQHFHAVFALWLVGIGMA 583
            ...:.|..     ::|.|........   .|..|:.||      .|.:..|..||.:...|:.::
Zfish   790 ELQQNGDMDILKLKWWPRDSPCDLYS---PVGTRKSGS------ALDIHSFAGVFFVLAAGVVLS 845

  Fly   584 CIVLA----W-------------------EHLTHNYNLAVTK 602
            |::..    |                   |||.|..|...|:
Zfish   846 CLIATVETWWTRRKGSRVPSKEDDKEIDLEHLHHRVNSLCTE 887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir85aNP_649833.1 None
grid2NP_001004123.1 PBP1_iGluR_delta_2 28..427 CDD:107386
ANF_receptor 42..404 CDD:279440
PBP2_iGluR_delta_2 440..806 CDD:270449 71/405 (18%)
Lig_chan 568..841 CDD:278489 54/302 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 989..1009
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591515
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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