DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir85a and GluRIID

DIOPT Version :9

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_651982.1 Gene:GluRIID / 44483 FlyBaseID:FBgn0028422 Length:902 Species:Drosophila melanogaster


Alignment Length:525 Identity:95/525 - (18%)
Similarity:176/525 - (33%) Gaps:152/525 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 WRDGRLNAYRYNPFMDNY---------------LIPVDNKPNEVPTLEQLFPKTIPNMQRKPLRM 208
            |.:|:...::..|...|:               ||.|..||  ..:|.:.....|.|.|.:...:
  Fly   390 WEEGKDFEFQRPPQAVNFNDIDDGSLVNKTFIVLISVATKP--YASLVESIDTLIGNNQFQGYGV 452

  Fly   209 CIYK---DDVRAIF-WRQG---------TILGTDGLLAAYVAERLNATMMITRPHSYNNHNLSSD 260
            .:.|   |.:...| :|.|         |...|.|:|...|..|  |.:.||            |
  Fly   453 DLIKELADKLGFNFTFRDGGNDYGSFNKTTNSTSGMLKEIVEGR--ADLAIT------------D 503

  Fly   261 ICFLEVAKEYVDVA---MNIRFLVPDTFRKQAESTVSHTRDDLCVIVPKAKTAPTFWNIFRSFGS 322
            :......:|.:|.:   ||:...:                    :.|...|..|..::....|.|
  Fly   504 LTITSEREEVIDFSIPFMNLGIAI--------------------LYVKPQKAPPALFSFMDPFSS 548

  Fly   323 LVWALILVSVLVANVFCYILKSEVGRV--------------PMQL------------FAGALTMP 361
            .||..:.::.|..:: |:.:   :||:              |.:|            ..|||...
  Fly   549 EVWLYLGIAYLGVSL-CFFI---IGRLSPIEWDNPYPCIEEPEELENQFTINNSLWFTTGALLQQ 609

  Fly   362 MTQIPPNH-SIRLFLIFWLYFGLLICSAFKGNLTSMMVFQPYLPDINQLGALARSHYHIIIRPRH 425
            .::|.|.. |.|.....|.:|.|::.|::..||.:.:..:.....||.:..||.:...:....:.
  Fly   610 GSEIAPKALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPTSPINSVKDLADNKDDVQYGAKR 674

  Fly   426 VKHIQHFLTLGHKHESRIREQMLEVSDTQMYEMMRNND---------IRFAYLEKYHIARFQVNS 481
            ....::|.:..   |..|..:|.|..:.....:|.||.         .::|:|.:.....|....
  Fly   675 TGSTRNFFSTS---EEPIYIKMNEYLNAHPEMLMENNQQGVDKVKSGTKYAFLMESTSIEFNTVR 736

  Fly   482 RVHM-HLGRPLFHLMNSCLVPFHAVYIVPYGS------PYLGFLDSLIRSSHEFGF-----ERYW 534
            ..:: .:|.||..              ..||.      ||....:..:....|.|.     .::|
  Fly   737 ECNLTKVGDPLDE--------------KGYGIAMVKNWPYRDKFNKALLELQEQGVLARLKNKWW 787

  Fly   535 DRIMNSAFIKSGVKVVNRRRGSGNDEPVVLKLQHFHAVFALWLVG--IGMACIVLAWEHLTH--- 594
            :.:        |..|.:.:  |.:|.|..|.:.:...::.:.::|  |.:...:|.|.:..:   
  Fly   788 NEV--------GAGVCSAK--SDDDGPSELGVDNLSGIYVVLVIGSIISIIISILCWCYFVYKKA 842

  Fly   595 -NYNL 598
             ||.:
  Fly   843 KNYEV 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir85aNP_649833.1 None
GluRIIDNP_651982.1 PBP1_iGluR_Kainate 35..397 CDD:107377 2/6 (33%)
ANF_receptor 46..380 CDD:279440
PBP2_iGluR_Kainate 417..788 CDD:270432 78/427 (18%)
Lig_chan 549..819 CDD:278489 52/300 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462842
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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