DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir85a and Ekar

DIOPT Version :9

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster


Alignment Length:434 Identity:75/434 - (17%)
Similarity:140/434 - (32%) Gaps:152/434 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 LAAYVAERLNATMMITRPHSYNNHNLSSDICFLEVAKEYVDVAMNIRFLVPDTFRKQAESTVSHT 296
            |..|.|:....:|.||    |...::      ::..|.::::.::|.|.||         |...|
  Fly   476 LMKYKADLAVGSMTIT----YARESV------IDFTKPFMNLGISILFKVP---------TSEPT 521

  Fly   297 RDDLCVIVPKAKTAPTFWNIFRSFGSLVWALILVSVLVANVFCYILKSEVGRV-PMQ-------- 352
            |               .::........:|..:|::..:.::..||    ||:: |::        
  Fly   522 R---------------LFSFMNPLAIEIWIYVLIAYFLVSLCIYI----VGKLSPIEWKCINACD 567

  Fly   353 -----------------LFAGALTMPMTQIPPN-HSIRLFLIFWLYFGLLICSAFKGNLTSMMVF 399
                             ...|........|.|. .|.|:....|.:|.|:|.:::..||.:.:..
  Fly   568 LENISIGNQFSLTDSFWFTIGTFMQQSPDIYPRAMSTRIISSTWGFFSLIIVASYTANLAAFLTT 632

  Fly   400 QPYLPDINQLGALARSHYHIIIRPRHVKHIQHFLTLGHKHESRIREQMLEVSDTQMY-------- 456
            :..:..|.....||                         .::.|....|:...|..:        
  Fly   633 ERMINPIENAEDLA-------------------------SQTEISYGTLDSGSTMTFFRDSVIET 672

  Fly   457 --EMMRNNDIR--FAYLEKYHIARFQVNSRVHMHLGRPLFHLMNSCLVPFHAVYIV--------- 508
              ::.|:.|.:  .|:...|.....:||.      |...| ||.|.::.    |||         
  Fly   673 YKKIWRSMDNKKPSAFTTTYEDGIKRVNQ------GNYAF-LMESTMLD----YIVQRDCNLTQI 726

  Fly   509 -------------PYGSPY-----LGFLDSLIRSSHEFGFERYWDRIMNSAFIKSGVKVVNRRRG 555
                         |.|||:     |..|:...|...:..::::|         |:..:...|:..
  Fly   727 GGLLDTKGYGIATPKGSPWRDKISLAILELQERGDIQMLYDKWW---------KNTDETCTRKNT 782

  Fly   556 SGNDEPVVLKLQHFHAVFALWLVGIGMACIVL---AWEHLTHNY 596
            |...:...|.|:....||.:.:.||.:|.:|.   .|.:..:||
  Fly   783 SKQSKANSLGLESIGGVFVVLIAGIIVAAVVAFFEFWYNFRYNY 826

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir85aNP_649833.1 None
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377
ANF_receptor 39..371 CDD:279440
PBP2_iGluR_Kainate 402..771 CDD:270432 61/377 (16%)
Lig_chan 533..807 CDD:278489 53/322 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463065
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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