DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir85a and Grik

DIOPT Version :9

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001262788.1 Gene:Grik / 42476 FlyBaseID:FBgn0038840 Length:907 Species:Drosophila melanogaster


Alignment Length:354 Identity:69/354 - (19%)
Similarity:116/354 - (32%) Gaps:100/354 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 KTAPTFWNIFRSFGSLVWALILVSVLVANVFCYILKSEVGRV--------------PMQL----- 353
            |..|..::....|...||..:.::.:..::..::|    ||:              |.:|     
  Fly   528 KEPPKLFSFMSPFSGEVWLWLGLAYMGVSISMFVL----GRLSPAEWDNPYPCIEEPTELENQFS 588

  Fly   354 FA-------GALTMPMTQIPPN-HSIRLFLIFWLYFGLLICSAFKGNLTSMMVFQPYLPDINQLG 410
            ||       |||....:::.|. :|.|.....|.:|.|::.|::..||.:.:..:..:..||...
  Fly   589 FANCLWFSIGALLQQGSELAPKAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDAD 653

  Fly   411 ALARSHYHIIIRPRHVKHIQHFLTLGHKHESRIREQMLEVSDTQMYEMMRNNDIRFAYLEKYHIA 475
            .|:::.          ..:.:...:|....:..:|....... :|||.||:|........:..:.
  Fly   654 DLSKNK----------GGVNYGAKIGGATFNFFKESNYPTYQ-RMYEFMRDNPQYMTNTNQEGVD 707

  Fly   476 RFQVNSRVHMHLGRPLFHLMNSCLVPFHAVYIVP----------------YGS------PYLGFL 518
            |.: ||....        ||.|..:.    ||..                ||.      ||...|
  Fly   708 RVE-NSNYAF--------LMESTTIE----YITERRCTLTQVGALLDEKGYGIAMRKNWPYRDTL 759

  Fly   519 DSLIRSSHEFGFERYWDRIMNSAFIKSGVKVVNRRRGSG----NDE---PVVLKLQHFHAVFALW 576
            ...:....|.|.           ..|...|....:||.|    .||   .|.|::.:...||.:.
  Fly   760 SQAVLEMQEQGL-----------LTKMKTKWWQEKRGGGACSDADEDSGAVALEISNLGGVFLVM 813

  Fly   577 LVGIGMACIVLAWEHLTHNYNLAVTKRRD 605
            .||......|...|.:     |.|.:|.|
  Fly   814 GVGSFFGIFVSLLEMV-----LGVKERSD 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir85aNP_649833.1 None
GrikNP_001262788.1 PBP1_iGluR_Kainate 37..391 CDD:107377
ANF_receptor 53..374 CDD:279440
Periplasmic_Binding_Protein_Type_2 411..781 CDD:304360 52/291 (18%)
Lig_chan 543..816 CDD:278489 58/311 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462835
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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