DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir85a and Ir56c

DIOPT Version :9

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_611431.1 Gene:Ir56c / 37251 FlyBaseID:FBgn0034457 Length:567 Species:Drosophila melanogaster


Alignment Length:588 Identity:115/588 - (19%)
Similarity:216/588 - (36%) Gaps:104/588 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 HEHTGQILKEVTKCD----------ISNQNTPLEAVKDDGILMYMVMI-TTNISQPLELSLIRKK 115
            |:...|:.:.:.:.|          :.|.||.:..:.......:|..: ||....|: :.:..|.
  Fly    27 HQRLDQLDEFIMRIDEAFGKSATQTVVNNNTEMRMIYSSARRNHMSFVFTTGAEDPI-MKVFSKV 90

  Fly   116 SAAKHRSHVFLL-----VRDADTVSDAWMRASFRQFWKIWLLNIVILYWRDGRLNAYRYNPFMDN 175
            ...:| .:|.::     |.|...:.|....|..:||:.    ::|.....:|....:..:.|   
  Fly    91 LLGRH-FYVSMVIYVDKVGDMHPIYDLLTFAYNQQFFN----SMVHFESMEGVNQLFGVSKF--- 147

  Fly   176 YLIPVDNKPNEVPTLEQL--FPKTIPNMQ--------RKPLRMCIYKDDVRAIFWRQGTILGTDG 230
               ||.:..|....|:.:  ..|.:.|.:        ..|||     .|:..:|..||...|:..
  Fly   148 ---PVMSFENRTDFLKYMGKIWKQVQNARSDVGGFGFTTPLR-----QDLPHLFQSQGHYDGSTY 204

  Fly   231 LLAAYVAERLNATM--MITRPHSYNNH--NLSSDICFLEVAK-EYVDVAMNIRFLVPDTFRKQAE 290
            .:.......:|.:.  :|..|.|....  |:...:..:...| |:...|..: |:..:...|...
  Fly   205 RIIETFVRFINGSFKELIMPPDSLGGQVINMKDALQLIRERKMEFCAHAYAL-FMSDEELEKSYP 268

  Fly   291 STVSHTRDDLCVIVPKAKTAPTF--------WNI-FRSFGSLVWALILVSVL------------- 333
            ..|.    ..|::||...:..|:        ||: |.:.|:|: ||:|:.::             
  Fly   269 LLVV----QWCLMVPLYNSVSTYFYPLQPFDWNVWFFALGALL-ALVLLELMWLRMFGGWSGYRG 328

  Fly   334 -VANVFCYILKSEVGRVPMQLFAGALTMPMTQIPPNHSIRLFLIFWLYF-GLLICSAFKGNLTSM 396
             |.|.||||:     .||::   |.|..|..       :|..|:..::| |..:.:.:..||.|:
  Fly   329 AVLNSFCYII-----NVPIE---GQLQQPCL-------LRFLLLATVFFHGFFLSAYYTSNLGSI 378

  Fly   397 MVFQPYLPDINQLGALARSHYHIIIRPRHVKHIQHFLTLGHKHESRIREQMLEVSDTQMYEMMRN 461
            :....:...||.:..:..:...::|....::.:   |.|..:......|.:..|......|...:
  Fly   379 LTVNLFHAQINTMNDIVSAQLPVMIIDYEMEFL---LNLNKELPQEFLELLRPVDSAVFSEHQTS 440

  Fly   462 NDIRFAY-LEKYHIARFQVNSRVHMHLGRPLFHLMNSCLVPFHAVYIVPYGSPYLGFLDSLIRSS 525
            .:..||| :.:.|   ::.......||.:.||.|.:.|...:|..:.:...|.....::......
  Fly   441 FNSSFAYFVTEDH---WEFLDEQQKHLKQRLFKLSSICFGSYHLAFPLQMDSSLWRDIEYFTFRI 502

  Fly   526 HEFGFERYWDRIMNSAFIKSGVKVVNRRRGSGNDEPVVLKLQHFHAVFALWLVGIGMACIVLAWE 590
            |..|...::.|....:.:.:|:.    :|.....|.....|||....|.|.||...:|.||...|
  Fly   503 HSSGLLNFYARSSFGSALHAGLV----QRMPDTQEYTSAGLQHLAIAFILLLVMSFLAGIVFVLE 563

  Fly   591 HLT 593
            .|:
  Fly   564 TLS 566



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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