DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir85a and clumsy

DIOPT Version :9

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001036373.1 Gene:clumsy / 35394 FlyBaseID:FBgn0026255 Length:1002 Species:Drosophila melanogaster


Alignment Length:390 Identity:72/390 - (18%)
Similarity:142/390 - (36%) Gaps:81/390 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 VAKEYVD--VAMNIRFLVPDTFRKQA-ESTVSHTRDDLCVIVPKAKTAPT-FWNIFRSFGSLVW- 325
            :.::.:|  ..:.|..|...:.|:|| :.|.......:.::..|..|.|| .::....|...|| 
  Fly   487 IVRQLIDGNADLGICDLTMTSSRRQAVDFTPPFMTLGISILFSKPPTPPTDLFSFLSPFSLDVWI 551

  Fly   326 ----ALILVSVL-----------------------VANVFCYILKSEVGRVPMQLFAGALTMPMT 363
                |.:.:|:|                       |.|::..:..:       .|..|:|   |.
  Fly   552 YMGSAYLFISLLLFALARMAPDDWENPHPCKEPEEVENIWSIMNTT-------WLSIGSL---MG 606

  Fly   364 Q----IPPNHSIRLFLIFWLYFGLLICSAFKGNLTSMMVFQPYLPDIN-----------QLGALA 413
            |    :|...|.||....|.:|.|::.:::..||.:.:........||           :.||:|
  Fly   607 QGCDILPKAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQANSINSAEDLAAQSKIKYGAMA 671

  Fly   414 RSHYHIIIRPRHVKHIQHFLTLGHKHESRIREQMLEVSDTQMYEMMRNNDIRFAYLEKYHIARFQ 478
            ........|..:....|...|   ..||.......:.:|..:..:.:..:: :|:|.:.....:.
  Fly   672 GGSTMGFFRDSNFSTYQKMWT---AMESASPSVFTKTNDEGVERVQKGKNL-YAFLMESTTLEYN 732

  Fly   479 VNSRVHM-HLGRPLFHLMNSCLVPFHAVYIVPYGSPYLGFLDSLIRSSHEFG----FERYWDRIM 538
            |..:..: .:|..|.:......:||:        |||...:.:.:....|.|    .:|.|.:.|
  Fly   733 VERKCDLVQIGGWLDYKSYGIAMPFN--------SPYRKQISAAVLKLGELGQLAELKRKWWKEM 789

  Fly   539 NSAFIKSGVKVVNRRRGSGNDEPVVLKLQHFHAVFALWLVGIGMACIVLAWEHLTHNYNLAVTKR 603
            :      |.....:....|.|.| .|.|::...||.:..:|:..|.::...|.|.:..::|:.::
  Fly   790 H------GGGNCEKSDEDGGDTP-ELGLENVGGVFLVLGLGLLSAMVLGCTEFLWNVKSVAIEEK 847

  Fly   604  603
              Fly   848  847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir85aNP_649833.1 None
clumsyNP_001036373.1 PBP1_iGluR_Kainate 26..396 CDD:107377
ANF_receptor 39..379 CDD:279440
PBP2_iGluR_Kainate 414..787 CDD:270432 58/321 (18%)
Lig_chan 548..812 CDD:278489 53/292 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462649
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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