DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir85a and GRIK3

DIOPT Version :9

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_000822.2 Gene:GRIK3 / 2899 HGNCID:4581 Length:919 Species:Homo sapiens


Alignment Length:771 Identity:138/771 - (17%)
Similarity:251/771 - (32%) Gaps:251/771 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IQWLK------------HILLLAILVNLAGTREN------HIPLDLKKSSIVMVKMSQILCKARI 49
            :|:||            .::.|..|: :|.:|.|      .:|:|...|..::.:|.:   ....
Human   167 VQYLKWRSATVVYDDSTGLIRLQELI-MAPSRYNIRLKIRQLPIDSDDSRPLLKEMKR---GREF 227

  Fly    50 KVLFVYFENQTSHEHTGQILKEV--------------TKCDISNQNTPLEAVKDDGILMYMVMIT 100
            :::|     ..||....||||:.              |..|:  ....||..:..|:.:....| 
Human   228 RIIF-----DCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDL--YALDLEPYRYSGVNLTGFRI- 284

  Fly   101 TNISQPLELSLIRKKS----AAKHRSHVFLL----VRDADTVSDAWMRASFRQFWKIWLLNIV-I 156
            .|:..|...:::.|.|    .|..||...||    :.||..:.||              ::|| :
Human   285 LNVDNPHVSAIVEKWSMERLQAAPRSESGLLDGVMMTDAALLYDA--------------VHIVSV 335

  Fly   157 LYWRDGRL----------NAYRYNPFMDNYLIPVDNKPNEVPTLEQLFPKTIPNMQRKPLRMCIY 211
            .|.|..::          .|:|:.....|:   :.....|..|...:|.||........|.:...
Human   336 CYQRAPQMTVNSLQCHRHKAWRFGGRFMNF---IKEAQWEGLTGRIVFNKTSGLRTDFDLDIISL 397

  Fly   212 KDDVRAIFWRQGTILGTDGLLAAYVAE-------------RLNATMMITRPH---------SYNN 254
            |:|.   ..:.|.....|||....||:             .|..|.::..|.         .|.|
Human   398 KEDG---LEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGN 459

  Fly   255 HNLSSDICFLEVAKEYVDV---AMNIRFLVPDTFRKQ----------------------AESTVS 294
            ..... .| :::.||...:   :..||.:....:..|                      |..|::
Human   460 DRFEG-YC-IDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTIT 522

  Fly   295 HTRD------------DLCVIVPKAK-TAPTFWNIFRSFGSLVWALILVSVLVANVFCYILK--- 343
            |.|:            .:.::..|.. |.|:.::........:|..:|::.|..:...:::.   
Human   523 HVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFS 587

  Fly   344 -------------SEVGRVPMQLF------AGALTMPMTQIPPNH-SIRLFLIFWLYFGLLICSA 388
                         |||......|.      .|:|....:::.|.. |.|:....|.:|.|:|.|:
Human   588 PYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISS 652

  Fly   389 FKGNLTSMMVFQPYLPDINQLGALARSHYHIIIRPRHVKH--IQHFLTLGHKHESRIR--EQMLE 449
            :..||.:.:..:.....|:....||:.        ..:::  ::...|:....:|:|.  |:|..
Human   653 YTANLAAFLTVERMESPIDSADDLAKQ--------TKIEYGAVKDGATMTFFKKSKISTFEKMWA 709

  Fly   450 VSDTQMYEMMRNND--IRFAYLEKYHIARFQVNSRVHMHLGRPLFHLMNSCLVPF------HAVY 506
            ...::...:::||:  |:.|....|.:                   ||.|..:.:      :...
Human   710 FMSSKPSALVKNNEEGIQRALTADYAL-------------------LMESTTIEYVTQRNCNLTQ 755

  Fly   507 I------------VPYGSPYLGFLDSLIRSSHE-----FGFERYWDRIMNSAFIKSGVKVVNRRR 554
            |            .|.||||...:...|....|     ...|::|                   |
Human   756 IGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHIMKEKWW-------------------R 801

  Fly   555 GSG-----NDEPVVLKLQHFHAVFALWLVGIGMACIVLAWEHLTHNYNLAVTKRRD 605
            |||     |.|...|.:|....:|.:...|:.::.:|...|.:   |.|..|..|:
Human   802 GSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFV---YKLRKTAERE 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir85aNP_649833.1 None
GRIK3NP_000822.2 PBP1_iGluR_Kainate_GluR5_7 34..417 CDD:107388 57/281 (20%)
ANF_receptor 55..398 CDD:279440 51/259 (20%)
PBP2_iGluR_Kainate_GluR7 433..801 CDD:270441 63/415 (15%)
Lig_chan 564..832 CDD:278489 54/313 (17%)
Glutamate binding. /evidence=ECO:0000250 690..692 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156181
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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