DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir85a and glr-7

DIOPT Version :9

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001337310.1 Gene:glr-7 / 180547 WormBaseID:WBGene00001618 Length:885 Species:Caenorhabditis elegans


Alignment Length:396 Identity:73/396 - (18%)
Similarity:145/396 - (36%) Gaps:105/396 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 DVAMNIRFLVPDTFRKQAESTVSHTRD--DLCVIVPKAKTAPTFWNIFRSFGSL---VWALILVS 331
            |:|     |.|.:...:.|:.|..|..  ||.......|.|...:::|:....|   ||..|:.:
 Worm   446 DIA-----LAPLSVMAERENDVDFTVPYYDLVGTTILMKKADVEYSLFKFMKVLEWPVWLCIVAA 505

  Fly   332 VLVANVFCYIL---------------KSEVGRVPMQLFAGALTMPMTQI--------PPNHSIRL 373
            .|..::..:|.               ::::.:....| ...|...||.:        |.|.|.||
 Worm   506 YLFTSILLWIFDRFSPYSFTNNKERYQNDIEKRQFSL-KECLWFCMTSLTPQGGGEAPKNISGRL 569

  Fly   374 FLIFWLYFGLLICSAFKGNLTSMMVFQPYLPDINQLGALARSHYHIIIRPRHVKHIQHFLTLGHK 438
            ....|..||.:|.:::..||.:.:........|:.|..||:.:           .|::....|..
 Worm   570 VAATWWLFGFIIIASYTANLAAFLTVSRLEQPISSLDDLAKQY-----------KIEYAPIKGSA 623

  Fly   439 HESRIREQMLEVSDT--QMYEMMRNNDIR------------FAYLEKY-HIARFQVNSRVHMHLG 488
            .|:..| :|.|:.:|  .|::.|..|:..            :...:|: ::.|:...|::.:::.
 Worm   624 SETYFR-RMAEIEETFYNMWKEMSLNESMSPRDRAKLAVWDYPVSDKFTNMWRYMQESKLPVNMD 687

  Fly   489 RPLFHLMNSCLVPFHAVYIVPYGSPYLGFLD----------SLIRSSHEFGFERYWDRIMNSAFI 543
            ..:..::||.           .|..::|...          :|.:...||..:.|...:.:...:
 Worm   688 TAVDRVLNSV-----------DGFAFIGDATEIKYAALTNCNLQQVGTEFSRKPYAIAVQSGHIL 741

  Fly   544 KSGVK-----VVNRRR------------------GSGNDEPVVLKLQHFHAVFALWLVGIGMACI 585
            |..:.     ::|.||                  ...:||...:.:|:...||.:.|.||.::.:
 Worm   742 KDKISSAILMLLNERRLETLKEKWWTDNPNKVSCPDSSDESDGISIQNIGGVFIVILAGIALSIV 806

  Fly   586 VLAWEH 591
            .||:|:
 Worm   807 TLAFEY 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir85aNP_649833.1 None
glr-7NP_001337310.1 Periplasmic_Binding_Protein_Type_1 <102..>220 CDD:324556
PBP2_iGluR_putative 373..767 CDD:270435 62/349 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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