DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir85a and Grid1

DIOPT Version :9

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_032192.2 Gene:Grid1 / 14803 MGIID:95812 Length:1009 Species:Mus musculus


Alignment Length:490 Identity:89/490 - (18%)
Similarity:162/490 - (33%) Gaps:165/490 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 VPTLEQLFPKTIPNMQRKPLRMCIYKDDV-----RAIFWRQGTILGTDGLLAAYVAERLNATMMI 246
            |..||:.|.....|:..:|.|...:..||     :|:.::.......||                
Mouse   442 VTVLEEPFVMVAENILGQPKRYKGFSIDVLDALAKALGFKYEIYQAPDG---------------- 490

  Fly   247 TRPHSYNNHNLSSDICFLEVAKEYVDVAMNIRFLVPDTFRKQAESTVSHTRD----DLCVIVPKA 307
              .:.:..||.|.:....|:..:..|:|::...:.|     :.||.|..::.    .:.:::.|.
Mouse   491 --RYGHQLHNTSWNGMIGELISKRADLAISAITITP-----ERESVVDFSKRYMDYSVGILIKKP 548

  Fly   308 KTAPTFWNIFRSFGSLVWALILVSVLVANVFCYIL------KSEVGRVP-----------MQLFA 355
            :...:.:::|..|...|||.|..::.|..|..::|      :|:....|           :.:..
Mouse   549 EEKISIFSLFAPFDFAVWACIAAAIPVVGVLIFVLNRIQAVRSQSATQPRPSASATLHSAIWIVY 613

  Fly   356 GALTMPMTQIPPNH-SIRLFLIFWLYFGLLICSAFKGNLTSMMVFQPYLPDINQLGALARSHYHI 419
            ||......:...|. ::|:.:..|..|.|::||::..||.:                        
Mouse   614 GAFVQQGGESSVNSVAMRIVMGSWWLFTLIVCSSYTANLAA------------------------ 654

  Fly   420 IIRPRHVKHIQHFLTLGHKHESRIR-----EQMLEVS-----DTQMYEMMR-------NNDIRFA 467
                        |||:. :.::.||     .:.||:|     |:.:||..|       ..|..||
Mouse   655 ------------FLTVS-RMDNPIRTFQDLSKQLEMSYGTVRDSAVYEYFRAKGTNPLEQDSTFA 706

  Fly   468 YLEKYHIARFQVNSRVHMHLGRP-----------LFHLMNSCLVPFHAV---------------- 505
            .|.:    ....|......:..|           ...|.:..:|.:.|:                
Mouse   707 ELWR----TISKNGGADNCVSNPSEGIRKAKKGNYAFLWDVAVVEYAALTDDDCSVTVIGNSISS 767

  Fly   506 ----YIVPYGSPYLGFLDSLIRSSHEFG-----FERYW------DRIMNSAFIKSGVKVVNRRRG 555
                ..:.:||||.......|....:.|     .:::|      |...:|               
Mouse   768 KGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQKWWPHTGRCDLTSHS--------------- 817

  Fly   556 SGNDEPVVLKLQHFHAVFALWLVGIGMACIVLAWE 590
            |...|...|||..|..||.:..:|:.:||:|.|.|
Mouse   818 STQTEGKSLKLHSFAGVFCILAIGLLLACLVAALE 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir85aNP_649833.1 None
Grid1NP_032192.2 Interaction with CBLN1. /evidence=ECO:0000269|PubMed:27418511 21..436
PBP1_iGluR_delta_1 25..423 CDD:107387
PBP2_iGluR_delta_1 436..806 CDD:270448 72/427 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..960
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846302
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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