DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir85a and LOC110438919

DIOPT Version :9

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_021328141.1 Gene:LOC110438919 / 110438919 -ID:- Length:1417 Species:Danio rerio


Alignment Length:661 Identity:131/661 - (19%)
Similarity:220/661 - (33%) Gaps:206/661 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ILVNLAGTRENHIPLDLKKSSIVMVKMS----QILCKARIKVLFVYFENQTS------HEHTGQI 68
            |:.:|.....:|||.:....   |:.:|    ....:||::.........||      ..||  :
Zfish   116 IVPSLVAGDADHIPAEFPTG---MISVSYDEWDYGLEARVRDGVAVIATATSTMMMDRGPHT--L 175

  Fly    69 LKEVTKC-DISNQNTPLEAVKDDGILMYMVMIT---TNISQPLELSLIRKKSAAKHRSHVFLLV- 128
            ||  ::| ...::.:|:.. .::.:|.|::.:|   .|:|       ..:.....|...|.:|: 
Zfish   176 LK--SECHGAPDKKSPMTG-NNNEVLRYLMNVTFEGRNLS-------FSEDGYQMHPKLVIILLD 230

  Fly   129 --RDADTVSDAWMRASFRQFWKIW---------------LLNIVILYWRDGRLNAYRYNPFMDNY 176
              |..|.|. .|...|....:.:|               .|:||.|          ...||    
Zfish   231 KERQWDRVG-KWENGSLSMKYHVWPRFELYSGPEAREDDHLSIVTL----------EEAPF---- 280

  Fly   177 LIPVDNKP-------NEVPTLEQLFPKTIPNMQRKPL---RMC------IYKDDVRAIFWRQGTI 225
            :|..|..|       |.||..:||  |.:...|...:   |.|      |.|...:.:.:.....
Zfish   281 VIVEDVDPLSGTCMRNTVPCRKQL--KALNQTQDSAVYIKRCCKGFCIDILKKIAKNVKFTYDLY 343

  Fly   226 LGTDGLLAAYVAERLNATM--MITRPHSYNNHNLSSDICFLEVAKEYVDVAMNIRFLVP------ 282
            |.|:|    ...:::|.|.  |:......|.|.....:...|...|.:|      |.||      
Zfish   344 LVTNG----KHGKKINGTWNGMVGEVVLKNAHMAVGSLTINEERSEVID------FSVPFIETGI 398

  Fly   283 DTFRKQAESTVSHTRDDLCVIVPKAKTAPTFWNIFRSFGSLVWALILVSVLVAN---VFCYILKS 344
            .....::..|||          |.|...|        |.:.||.::.|.:|:.:   ||.:...|
Zfish   399 SVMVSRSNGTVS----------PSAFLEP--------FSADVWIMMFVMLLLVSAIAVFIFEYFS 445

  Fly   345 EVG------------------RVPMQLFAGAL---TMPMTQIPPNHSIRLFLIFWLYFGLLICSA 388
            .||                  ...:.|..|.:   ::|: |.|...:.::.:..|.:|.::..::
Zfish   446 PVGYNRCLADGREAGGPSFTIGKAIWLLWGLVFNNSVPV-QNPRGTTSKIMVSVWAFFAVIFLAS 509

  Fly   389 FKGNLTSMMVFQPYLPDINQLGALARSHYHIIIRPRHVKHIQHFLTLGHKHESRIREQMLEVSDT 453
            :..||.:.|:.:.|   ::|:..|:...:.   .|........|.|:.:....|           
Zfish   510 YTANLAAFMIQEEY---VDQVSGLSDKKFQ---NPNDFSPPFRFGTVPNGSTER----------- 557

  Fly   454 QMYEMMRNNDIRFAYLEKYHIARFQVNSRVHMHLGRPLFHLMNSCLVPFHAVYIV-PYGSPYLGF 517
                .:|||                             :..|:|.:|.||...:| ...|...|.
Zfish   558 ----NIRNN-----------------------------YRDMHSYMVKFHQRNVVEALESLKTGK 589

  Fly   518 LDSLIRSSHEFGFERYWDRIMNSAFIKSGVKV-------VNRRRGSGNDEPVVLK-LQHF----- 569
            ||:.|..:....:....|.......|.|| ||       :..::.||....|.|. ||.|     
Zfish   590 LDAFIYDAAVLNYMAGRDEGCKLVTIGSG-KVFASTGYGIAIQKDSGWKRQVDLAILQLFGDGEM 653

  Fly   570 HAVFALWLVGI 580
            ..:.||||.||
Zfish   654 EELEALWLTGI 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir85aNP_649833.1 None
LOC110438919XP_021328141.1 PBP1_iGluR_NMDA_NR2 <1..255 CDD:107373 31/154 (20%)
PBP2_iGluR_NMDA_Nr2 267..667 CDD:270436 100/494 (20%)
DUF4013 <389..478 CDD:315788 21/106 (20%)
NMDAR2_C 704..1417 CDD:313729
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591419
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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