DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir85a and LOC100149482

DIOPT Version :9

Sequence 1:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_009290417.1 Gene:LOC100149482 / 100149482 -ID:- Length:1959 Species:Danio rerio


Alignment Length:602 Identity:117/602 - (19%)
Similarity:211/602 - (35%) Gaps:209/602 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 RKKSAAKHRSHVFLLVRDADTVSDAWMRASFRQFWKIWLLNIV----------ILYWRDG----R 163
            |.:...::.|::.|..||....::.::...|        |:::          :.:|.:|    |
Zfish   359 RIRGRMRYFSNITLGGRDYSFSNEGYLANPF--------LDVISYTPGSGWEDVGWWENGVLRLR 415

  Fly   164 LNAY-RYNPFMDNYLIPVDNKPNEVPTLEQLFPKTIPNMQ--------------RKPLRMCIYKD 213
            ..|: ||.||:..   |.|.:...|.|||:. |..|..:.              |:||.....::
Zfish   416 YPAWSRYGPFLQP---PDDAQHLRVVTLEER-PFVIVELADAASGTCIRDSVPCRRPLNASALQE 476

  Fly   214 DVRA-----------IFWRQGTILG----------------TDGLLAAYVAERL--NATMMITRP 249
            .|..           |..|...|:|                .||:....|.|.:  .|.|.|   
Zfish   477 GVAPVKQCCKGFCIDILKRLARIVGFTYDLYLVTNGKHGKKIDGVWNGMVGEVVYKRADMAI--- 538

  Fly   250 HSYNNHNLSSDICFLEVAKEYVDVAMNIRFLVP------DTFRKQAESTVSHTRDDLCVIVPKAK 308
                     ..:...|...|.||      |.||      .....::..|||          |.|.
Zfish   539 ---------GSLTINEERSEVVD------FSVPFVETGISVMVSRSNGTVS----------PSAF 578

  Fly   309 TAPTFWNIFRSFGSLVWALILV---SVLVANVFCYILKSEVGRVPMQLFAG-------------- 356
            ..|        :...||.::.|   :|:...||.:...|.|| ....|.:|              
Zfish   579 LEP--------YSPAVWVMMFVMCLTVVAVTVFIFEFFSPVG-YNRSLQSGKKAGGSKFTIGKSI 634

  Fly   357 ----AL----TMPMTQIPPNHSIRLFLIFWLYFGLLICSAFKGNLTSMMVFQPYLPDINQLGALA 413
                ||    ::|: :.|...:.::.::.|.:|.::..:::..||.:.|:.:.|:..::.|..  
Zfish   635 WLLWALVFNNSVPV-ENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSD-- 696

  Fly   414 RSHYHIIIRPRHVKHIQH---------FLTLGH-KHESRIREQMLEVSDTQMYEMMRNNDIRFAY 468
                         |..||         |.|:.: ..|..||..         |..|..      |
Zfish   697 -------------KKFQHPTEQYPPLKFGTVPNGSTEKNIRSN---------YPDMHQ------Y 733

  Fly   469 LEKYHIARFQVNSRV-HMHLGRPLFHLMNSCLVPFHA-------VYIVPYGSPY--LGFLDSLIR 523
            :.||:  :..|...: |:..|:....:.::.::.:.|       |..:..|..:  .|:..:||:
Zfish   734 MVKYN--QKSVEDAISHLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFATTGYGIALIK 796

  Fly   524 SSHEFGFERYWDRIMNSAFIK----SGVKVVNRRRGSG---NDEPVV----LKLQHFHAVFALWL 577
            :|.       |.|.::.|.::    ..::::.|...||   ||:..|    |.:.:...||.:.|
Zfish   797 NSR-------WKRPLDLALLQLVGDDEIEMLERLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLL 854

  Fly   578 VGIGMACIVLAWEHLTH 594
            |.:|::.:|.|||||.:
Zfish   855 VAMGLSLLVFAWEHLVY 871

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir85aNP_649833.1 None
LOC100149482XP_009290417.1 PBP1_iGluR_NMDA_NR2 44..421 CDD:107373 11/69 (16%)
PBP2_iGluR_NMDA_Nr2 433..831 CDD:270436 85/475 (18%)
HisJ <487..>570 CDD:223904 18/100 (18%)
Lig_chan 585..857 CDD:278489 59/312 (19%)
NMDAR2_C 868..>900 CDD:287527 2/4 (50%)
FAM76 <1763..>1856 CDD:292665
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591656
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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