DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13318 and CG43110

DIOPT Version :10

Sequence 1:NP_649831.1 Gene:CG13318 / 41048 FlyBaseID:FBgn0037627 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster


Alignment Length:283 Identity:73/283 - (25%)
Similarity:113/283 - (39%) Gaps:46/283 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LTCSYGLVACCQAGSYQCG-RRFPPPPGSTTAAP-----GQASFGAYPWQAALLTTADVYLGGGA 192
            :|..:..:..|..||.|.. ..|...|...|..|     ..||..:..:.|.:..|..: |.||.
  Fly     1 MTYLFVWIFLCSLGSCQLAYSMFLKQPCGKTPVPKIISGSNASQQSAQYMAGIFNTTHL-LCGGT 64

  Fly   193 LITAQHVLTAAHKVYNLGLTYFKVRLGEWDAASTSEPIPAQDVYISNVYVNPSFNPNNLQNDVAI 257
            :|....|||.||  .....|.| ||||.::...     |...:.:.....:|.::.:...||:|:
  Fly    65 IIHEDFVLTVAH--CKSTQTLF-VRLGAYNINH-----PTDQIRVIETIAHPQYSNSTYANDIAL 121

  Fly   258 LKLSTPVSLTSKSTVGTVCLPTTSFVGQ--RCWVA-GWGKNDFGATGAYQA-IERQVDV----PL 314
            :||..  |:.....:..:|:...:.:|:  |.:.| |||:    ...|.|: |.:::.|    |:
  Fly   122 VKLER--SVIFNLNIQPICIHLDATLGKQIRYYNAFGWGR----TRNAEQSDILQRIFVNRTNPM 180

  Fly   315 IPNANCQAALQATRLGSSFVLSP-TSFICAGGEAGKDACTGDGGSPLV--CTSNGVWYVVGLVAW 376
            |    |...|.         :|| ...|||..:.| |.|.||.|.||:  .|..|..:.......
  Fly   181 I----CHLYLG---------MSPDPKQICATTDQG-DTCAGDSGGPLISKITYQGKNFDTQFGIT 231

  Fly   377 GIGCAQAGVPGVYVNVGTYLPWI 399
            ..|..:....|:|.:|..|..||
  Fly   232 SYGTRECNGVGLYTDVSQYSGWI 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13318NP_649831.1 CLIP_1 <91..145 CDD:465709 1/10 (10%)
Tryp_SPc 169..402 CDD:238113 64/242 (26%)
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 64/248 (26%)

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