DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8223 and sim3

DIOPT Version :9

Sequence 1:NP_001246993.1 Gene:CG8223 / 41045 FlyBaseID:FBgn0037624 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_595313.1 Gene:sim3 / 2540895 PomBaseID:SPBC577.15c Length:396 Species:Schizosaccharomyces pombe


Alignment Length:494 Identity:98/494 - (19%)
Similarity:190/494 - (38%) Gaps:135/494 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VSSPSKTVAVEPVAADTTPDNAPAVSTEGSGKAEQERAEKILKGKELFSQGSRNFLVKSYDEAAD 80
            :||.:||:      .::..::|....|:....::....|      :|.:||:..:..|:|:||.|
pombe     1 MSSDTKTL------ENSKGNSATDADTKNPSSSDSRAIE------QLVTQGNMAYAQKNYEEAVD 53

  Fly    81 ELSQVCQLYEEVYGELADELGQPLLLYAKALIAMALDENKVIDVPDEAADDDDEDVDDDEEESAE 145
            :..|.....|.::|..:.|....|.||.|:|..:|::.::|:                .....|:
pombe    54 KYGQALMQSESIHGSESLENRNVLWLYGKSLFQIAIENSQVL----------------GNALGAK 102

  Fly   146 DGAAKKEEKKDTKEAANGASSSNGKELDTIKEGSDEADSTGEAEQAQSDEKPSKKVPTGVDEVSS 210
            :..::..|..:..||. |:.:.:|::::.....::|..|....|: :|:||.             
pombe   103 ESVSQATESFEEPEAI-GSFTFSGQKIENKYTVNEENSSIAHPEK-ESEEKE------------- 152

  Fly   211 SNGGGGAAVNDDERPSTSNGEVTASCSNGAAPAVEEEPEEEEGVSGSLQLAWEILEAAAQIFSRQ 275
                                      :|.|:||.||:.::       ..:|||:|: ..::...:
pombe   153 --------------------------TNEASPASEEDEDD-------FNVAWEVLD-LTRVMQSK 183

  Fly   276 GLSGLPYLAEVQTELANI---------EFENGILEAAREDYEKAL----KIHGELPTRNRRALAE 327
            .:...|...:.:..||:|         |.||  ...|.:|.:.||    |::.   ..|...|:|
pombe   184 AVDAYPDSKDEKIRLADIYDLLGELSLEIEN--FSQASQDLKTALEWKEKVYN---VSNNTLLSE 243

  Fly   328 LHYKIGL----TYLMQQLNKEGATALRQSSVLI--------EEEIAEIKGKDEPSERDRNNMLDL 380
            .|||:.|    |......||..|....:.:..|        |.|:.:.|||.:....:.....||
pombe   244 AHYKLALALEFTNPEDPSNKSRACEHVEKAAEILKNVLNERENEVTDKKGKGKQKAEESTLTSDL 308

  Fly   381 EETKQEILAKIQEIEEMQAQTIAEVRAALDSYIKPMSSGDAAAASSSSSSSANGAASSSSSSSKG 445
            |..: |:|:::::                    |.:.....|.:...:..|....:|..|..|..
pombe   309 ENLR-EMLSELEQ--------------------KTLDLKHGAPSLEEAVMSKMHESSLLSKDSSS 352

  Fly   446 AAAASSSTISSSSAKPTDITHLIKRKKPED---PSSEAE 481
            .|.|.:..:.:::    |:..|:|||:.:.   .||:.|
pombe   353 LAQAVAEAVKNAN----DLGGLVKRKRTKQEVTSSSQKE 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8223NP_001246993.1 TPR_12 281..352 CDD:290160 23/87 (26%)
TPR repeat 283..313 CDD:276809 10/42 (24%)
TPR repeat 326..351 CDD:276809 9/28 (32%)
sim3NP_595313.1 SHNi-TPR 199..236 CDD:287487 10/41 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4563
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005069
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103724
Panther 1 1.100 - - LDO PTHR15081
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1336
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.890

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