DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment M1BP and Zkscan8

DIOPT Version :9

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_631880.2 Gene:Zkscan8 / 93681 MGIID:1913815 Length:588 Species:Mus musculus


Alignment Length:466 Identity:111/466 - (23%)
Similarity:175/466 - (37%) Gaps:124/466 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EALTGLRLENYGCL-PD-----QICECCSM---------ELASAVKLRERCIAAQRELLLGLTEE 90
            |||..||...:..| ||     ||.|...:         ||.:.||  |..:....|::..|.:.
Mouse    68 EALIQLRAFCHQWLRPDLNSKEQILELLVLEQFLTILPGELQALVK--EHQLQNGEEVVTLLEDL 130

  Fly    91 QRQGISAFYRAA--------VMGEDIVQTVKTPDDDEVYATYQEIVLEEP-KEEIDDTKVEYDNT 146
            :|| |:...|..        |:.::::.:....:...::......|.:.| .::..|.....|.|
Mouse   131 ERQ-INVLGRPVSTHTHGHRVLWDEVIPSKSASEPPSIHVQSLATVPKSPVPQKPQDRGKRPDFT 194

  Fly   147 YYEVA---------EGHAGEDDAASLIEEADYDSIMAEDEEQQQTLELDEDTELIVGDVNDAYVY 202
            |..::         :|.:|:.:..:.:..|.:           ||||..||  :.|..:.:.::.
Mouse   195 YNAMSSSQKPTPSQKGSSGDQEVTARLLTAGF-----------QTLERIED--MAVSLIREEWLL 246

  Fly   203 DSDDEVAVLDN---------VLDDEYEHENIVVKKCSLPPK----PKVR-SDDARRRGTGGVYI- 252
            |...:....||         .||.|...||     ..|.||    |.:: ..:|..:..|.|.: 
Mouse   247 DPSQKDLNRDNRPEKYRNMFSLDGETRSEN-----KELFPKQGISPGIQPHGEATAKCNGDVIVG 306

  Fly   253 ---------------------------CEQCGNHIKGRMAFELHCRRHRGDKQFGCELCQSRFCT 290
                                       |::||...........|.|.|.|:|.:.|.:|...|..
Mouse   307 LAHGETQDLLGKLERHQGNPTQERRHKCDECGKSFAQNSGLVRHWRIHTGEKPYQCTVCGKAFSY 371

  Fly   291 TSEL----------KR------------------HMRKHTGERPFACKYCGRCFTDYTTRVKHER 327
            .|.|          ||                  |.|.||||:|:.|..||:.|:.....:.|:|
Mouse   372 RSALLSHQDIHNKVKRYHCKECGKAFSQNTGLILHQRIHTGEKPYQCNQCGKAFSQSAGLILHQR 436

  Fly   328 THTNERPYVCGTCGKAFTTGYILKNHMLIHSGERAYRCELCDKSFMLPTHLSTHFRSGVHKRHLE 392
            .|:.||||.|..|||||:....|..|..||:||:.|.|:.|.|:|...:||..|.||...::..:
Mouse   437 IHSGERPYECNECGKAFSHSSHLIGHQRIHTGEKPYECDECGKTFRRSSHLIGHQRSHTGEKPYK 501

  Fly   393 KAEMKQVLEQE 403
            ..|..:...|:
Mouse   502 CNECGRAFSQK 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871 17/57 (30%)
C2H2 Zn finger 253..273 CDD:275368 5/19 (26%)
COG5048 276..>331 CDD:227381 22/82 (27%)
C2H2 Zn finger 281..301 CDD:275368 9/47 (19%)
zf-H2C2_2 293..317 CDD:290200 13/51 (25%)
C2H2 Zn finger 309..329 CDD:275368 6/19 (32%)
zf-H2C2_2 324..346 CDD:290200 13/21 (62%)
C2H2 Zn finger 337..357 CDD:275368 8/19 (42%)
zf-H2C2_2 350..372 CDD:290200 10/21 (48%)
C2H2 Zn finger 365..383 CDD:275368 7/17 (41%)
Zkscan8NP_631880.2 SCAN 48..158 CDD:128708 23/92 (25%)
KRAB_A-box 233..268 CDD:143639 6/36 (17%)
COG5048 <322..574 CDD:227381 57/191 (30%)
C2H2 Zn finger 334..354 CDD:275368 5/19 (26%)
C2H2 Zn finger 363..382 CDD:275368 4/18 (22%)
C2H2 Zn finger 390..410 CDD:275368 2/19 (11%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
C2H2 Zn finger 446..466 CDD:275368 8/19 (42%)
C2H2 Zn finger 474..494 CDD:275368 8/19 (42%)
C2H2 Zn finger 502..522 CDD:275368 2/11 (18%)
C2H2 Zn finger 530..550 CDD:275368
C2H2 Zn finger 558..578 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.