DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and CG4854

DIOPT Version :9

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster


Alignment Length:387 Identity:111/387 - (28%)
Similarity:169/387 - (43%) Gaps:88/387 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CRVCAKYASNKRSPKLFERSNTKMI-------DNIEALTGLRLENYGCLPDQICECCSMELASAV 70
            ||:|           |.:..:..::       |.|:..||:.|......|::||..|::.|.:|:
  Fly    12 CRIC-----------LVQPKDESLMPTEPDFPDKIKRCTGVELSESPDWPNRICTSCALLLRAAL 65

  Fly    71 KLRERCIAAQRELLLGLTEEQRQGISAFYRAAVMGEDIVQTVKTPDDDEVYATYQEIVLEEPKEE 135
            |||..|...:::|     :||:                               .|||.:|...:|
  Fly    66 KLRSLCQQTEKDL-----KEQK-------------------------------LQEINIEIVHDE 94

  Fly   136 IDDTKVEYDNTYYEVAEGHAGEDDAASLIEEADYDSIMAEDEEQQQTLELDEDTELIVGDVNDAY 200
             .:||.:.::.  ::::..|...|:     |.:|:.:.:.|    .|||..||            
  Fly    95 -QETKKKTESR--DLSKNEATGSDS-----ELEYEYLDSYD----VTLESSED------------ 135

  Fly   201 VYDSDDEVAVLDNVLDDEYEHENIVVKKCSLPPKPKVRSDDARRRGTGGVYICEQCGNHIKGRMA 265
            |..|.||:..::..:....|      ...||.|||....|:  ..|....:.|..|.|....|:.
  Fly   136 VACSADELVSIEPAISAPEE------SVYSLSPKPVTFEDE--DSGQAASFTCNICNNVYSERVK 192

  Fly   266 FELHCRRHRGDKQFGCELCQSRFCTTSELKRHMRKHTGERPFACKYCGRCFTDYTTRVKHERTHT 330
            ...|.:.|...|...||:|..||..|.:|.|||..|||.||:.|.||...|.|.:||:||:|.||
  Fly   193 LTNHMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSRFADPSTRIKHQRIHT 257

  Fly   331 NERPYVCGTCGKAFTTGYILKNHMLIHSGERAYRCELCDKSFMLPTHLSTHFRSGVHKRHLE 392
            |||||.|..|.::|....:|:.|:..|:|||.:.|:.|.|||....|.::|.:|  |||..|
  Fly   258 NERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNSHEKS--HKRTKE 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871 19/77 (25%)
C2H2 Zn finger 253..273 CDD:275368 5/19 (26%)
COG5048 276..>331 CDD:227381 27/54 (50%)
C2H2 Zn finger 281..301 CDD:275368 10/19 (53%)
zf-H2C2_2 293..317 CDD:290200 12/23 (52%)
C2H2 Zn finger 309..329 CDD:275368 10/19 (53%)
zf-H2C2_2 324..346 CDD:290200 13/21 (62%)
C2H2 Zn finger 337..357 CDD:275368 5/19 (26%)
zf-H2C2_2 350..372 CDD:290200 9/21 (43%)
C2H2 Zn finger 365..383 CDD:275368 7/17 (41%)
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071 12/55 (22%)
C2H2 Zn finger 180..200 CDD:275368 5/19 (26%)
zf-H2C2_2 193..217 CDD:290200 8/23 (35%)
COG5048 201..>258 CDD:227381 27/56 (48%)
C2H2 Zn finger 208..228 CDD:275368 10/19 (53%)
zf-H2C2_2 221..244 CDD:290200 12/22 (55%)
C2H2 Zn finger 236..256 CDD:275368 10/19 (53%)
zf-H2C2_2 251..273 CDD:290200 13/21 (62%)
C2H2 Zn finger 264..284 CDD:275368 5/19 (26%)
zf-H2C2_2 277..301 CDD:290200 11/23 (48%)
C2H2 Zn finger 292..312 CDD:275368 8/21 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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