DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and CG6813

DIOPT Version :9

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster


Alignment Length:390 Identity:106/390 - (27%)
Similarity:150/390 - (38%) Gaps:118/390 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CRVCAKYASNKRSP-KLFERSNTKMIDNIEALTGLRLENYGCLPDQICECCSMELASAVKLRERC 76
            ||:|    |...:| .||...|..::..|.::||:.|.....:..|:|..|...|.:|:|.|:||
  Fly     6 CRIC----SRSDAPIDLFGPGNGHLVRQIHSITGVELSCKKEISGQMCTTCLDNLQAAIKFRQRC 66

  Fly    77 IAAQRELLLGLTEEQRQGISAFYRAAVMGEDIVQTVKTPDDDEVYATYQEIVLEEPKEEIDDTKV 141
            |.|:::.|                                                      .::
  Fly    67 IIAEKQNL------------------------------------------------------ERI 77

  Fly   142 EYDNTYYEVAEGHAGEDDAASLIEEADYDSIMAED-EEQQQTLELDEDTELIVGDVNDAYVYDSD 205
            |.|:                   ::...|.|:.|| ::.|...||||                  
  Fly    78 ECDS-------------------KDCSTDPIIYEDIDDNQIESELDE------------------ 105

  Fly   206 DEVAVLDNVLDDEYEHENIVVKKCSLPPKPKVRSDDARRR-----GTGGVYICEQCGNHIKGRMA 265
                   ::|..|       ||...:|...||.:..:...     |..|.|:|..||..|..:..
  Fly   106 -------SILCPE-------VKDLPMPSAEKVSAPTSLNHQKSIGGGTGPYVCPDCGRIINNKSN 156

  Fly   266 FELHCRRHRGDKQFGCEL--CQSRFCTTSELKRHMRKHTGERPFACKYCGRCFTDYTTRVKHERT 328
            |:.|..||.|.|.|.|..  |:..|.|..||..|.|.||||:|:.|.||.|.|:....|.:|.|.
  Fly   157 FQEHTLRHTGIKNFHCVFLNCERSFATRKELTSHTRIHTGEQPYVCVYCPRRFSSSGARQEHHRR 221

  Fly   329 HTNERPYVCGTCGKAFTTGYILKNHMLIHSGERAYRCELCDKSFMLPTHLSTHFRSGVHKRHLEK 393
            |.|||.|.|.||.|:|.:...|:.|.:||...|.:.|.:|.|.|...:||.||..|.:|||..||
  Fly   222 HRNERRYECDTCKKSFVSSGCLRKHKMIHVDARNHYCYVCQKHFKRISHLMTHLSSNIHKRKEEK 286

  Fly   394  393
              Fly   287  286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871 23/71 (32%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
COG5048 276..>331 CDD:227381 24/56 (43%)
C2H2 Zn finger 281..301 CDD:275368 8/21 (38%)
zf-H2C2_2 293..317 CDD:290200 13/23 (57%)
C2H2 Zn finger 309..329 CDD:275368 8/19 (42%)
zf-H2C2_2 324..346 CDD:290200 12/21 (57%)
C2H2 Zn finger 337..357 CDD:275368 7/19 (37%)
zf-H2C2_2 350..372 CDD:290200 8/21 (38%)
C2H2 Zn finger 365..383 CDD:275368 8/17 (47%)
CG6813NP_001163590.1 zf-AD 6..76 CDD:285071 24/127 (19%)
C2H2 Zn finger 144..164 CDD:275368 6/19 (32%)
C2H2 Zn finger 172..194 CDD:275368 8/21 (38%)
zf-H2C2_2 186..211 CDD:290200 14/24 (58%)
UFD2 <256..>294 CDD:227443 14/31 (45%)
C2H2 Zn finger 258..280 CDD:275368 9/21 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I19075
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000724
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24388
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.060

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