DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and ranshi

DIOPT Version :9

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster


Alignment Length:387 Identity:154/387 - (39%)
Similarity:219/387 - (56%) Gaps:56/387 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CRVCAKYASNKRSPKLFERSNTKMIDNIEALTGLRLENYGCLPDQICECCSMELASAVKLRERCI 77
            ||.|.|..:.:||..:||:.|...:::|:.|||..|:|...||:::|..|...|..|:..||||:
  Fly     6 CRTCGKRTNAERSLNIFEKRNQTTLEHIKLLTGAVLKNCSTLPNRLCASCQTCLQQAISFRERCL 70

  Fly    78 AAQRELLLGLTEEQRQGISAFYRAAVMGEDIVQTVKTPDDDEVYATYQEIVLEEPKEEIDDTKVE 142
            ..|||||                            .:.||::    :..|..|.||..::..::|
  Fly    71 EVQRELL----------------------------HSQDDED----FLRICQESPKSVLEQEELE 103

  Fly   143 YDNTYYEVAEGHAGEDDAASLIEEADYDSIMAEDEEQQQTLELDEDTELIVGDVN----DAYVYD 203
            .|.....:      |.:....:.|....|...:.|:.....:::||......|::    |..:|:
  Fly   104 LDLAEISI------EVERLDDLNEGPIQSSGFKVEDILNESKINEDEPNNEDDIDYSEMDYLIYE 162

  Fly   204 SDDEVAVLDNVLDDEYEHENIVVKKCSLPPKPKVRSDDARRRGTGGVYICEQCGNHIKGRMAFEL 268
            ||.||.....:..|.   ||           ||.|.:....|.:...:.||:||||||.|::|.|
  Fly   163 SDTEVDAKQELKSDS---EN-----------PKKRRNRRNPRDSNRTFFCEECGNHIKDRISFIL 213

  Fly   269 HCRRHRGDKQFGCELCQSRFCTTSELKRHMRKHTGERPFACKYCGRCFTDYTTRVKHERTHTNER 333
            ||:||||.|:||||.|:.||||.:|||||:||||||:||.|::|.|.|:||:||:||||||||||
  Fly   214 HCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTNER 278

  Fly   334 PYVCGTCGKAFTTGYILKNHMLIHSGERAYRCELCDKSFMLPTHLSTHFRSGVHKRHLEKAE 395
            |:||..|..||||.||||||||:|:||:|:||:||||.|...|||:||:||..|:|:::||:
  Fly   279 PFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYRSNAHRRNMQKAD 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871 28/70 (40%)
C2H2 Zn finger 253..273 CDD:275368 13/19 (68%)
COG5048 276..>331 CDD:227381 37/54 (69%)
C2H2 Zn finger 281..301 CDD:275368 13/19 (68%)
zf-H2C2_2 293..317 CDD:290200 16/23 (70%)
C2H2 Zn finger 309..329 CDD:275368 12/19 (63%)
zf-H2C2_2 324..346 CDD:290200 16/21 (76%)
C2H2 Zn finger 337..357 CDD:275368 14/19 (74%)
zf-H2C2_2 350..372 CDD:290200 16/21 (76%)
C2H2 Zn finger 365..383 CDD:275368 11/17 (65%)
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 28/70 (40%)
C2H2 Zn finger 198..218 CDD:275368 13/19 (68%)
COG5048 222..>276 CDD:227381 37/53 (70%)
C2H2 Zn finger 226..246 CDD:275368 13/19 (68%)
zf-H2C2_2 238..262 CDD:290200 16/23 (70%)
C2H2 Zn finger 254..274 CDD:275368 12/19 (63%)
zf-H2C2_2 269..291 CDD:290200 16/21 (76%)
C2H2 Zn finger 282..302 CDD:275368 14/19 (74%)
zf-H2C2_2 295..319 CDD:290200 17/23 (74%)
C2H2 Zn finger 310..328 CDD:275368 11/17 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447746
Domainoid 1 1.000 48 1.000 Domainoid score I19075
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG26093
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000724
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_120097
Panther 1 1.100 - - P PTHR24388
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.900

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